C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glypican 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175665 Gpc5-003 ENSMUSG00000022112 10090 + 14:115092272-115417821 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverPlacentaTestisENSMUST00000175665
Transcript ID Adrenal Breast Kidney Liver Placenta Testis
ENSMUST00000175665 1.028±0.24 0.024±0.00 0.241±0.06 0.006±0.00 0.011±0.00 0.053±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EC CIL_0002EC_0002 CGP 14:115092215-117979529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005887 ISS integral component of plasma membrane
GO:0031225 IEA anchored component of membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377067 GPC5-001 protein_coding Homo_sapiens 0 1280
ENST00000618596 GPC5-201 protein_coding Homo_sapiens 0 933

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