C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 22 (organic cation transporter), member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022199 Slc22a17 10090 - 14:54906727-54913132 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050772 Slc22a17-201 54906727-54913132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050772 11.514±6.35 30.648±2.76 39.956±13.85 123.354±68.73 8.618±3.69 2.545±0.54 1.109±0.90 8.647±1.71 0.954±0.76 6.499±3.17 0.452±0.11 25.678±14.10 5.640±1.24 1.905±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_00051C CIL_00051C_0002 CGP 14:54892500-54913132
CIL_00051E CIL_00051E_0002 CGP 14:54906727-54926788

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IMP transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005773 IEA vacuole
GO:0005887 ISS integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007165 IMP signal transduction
GO:0015891 IMP siderophore transport
GO:0022857 IEA transmembrane transporter activity
GO:0031301 ISS integral component of organelle membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077218 SLC22A17 (1 of 2) solute carrier family 22, member 17 protein_coding Danio_rerio
ENSDARG00000088468 SLC22A17 (2 of 2) solute carrier family 22, member 17 protein_coding Danio_rerio
ENSG00000092096 SLC22A17 solute carrier family 22, member 17 protein_coding Homo_sapiens

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