C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022300 Dcaf13 10090 + 15:39112865-39146856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022909 Dcaf13-001 39112865-39146856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022909 3.384±0.29 1.267±0.32 13.332±0.13 14.147±0.72 2.061±0.69 2.780±0.51 2.260±0.59 3.555±1.71 8.857±6.77 3.260±1.46 5.434±0.43 7.258±8.44 21.309±7.55 4.235±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060C CIL_00060C_0002 CGP 15:39094191-39146856
CIL_00060F CIL_00060F_0002 CGP 15:39112865-39681940

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002267 dcaf13 ddb1 and cul4 associated factor 13 protein_coding Danio_rerio
ENSG00000164934 DCAF13 DDB1 and CUL4 associated factor 13 protein_coding Homo_sapiens

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