C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164934 DCAF13 9606 + 8:103414714-103443453 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297579 DCAF13-001 103414714-103443453 protein_coding
  ENST00000518554 DCAF13-002 103415412-103443450 retained_intron
  ENST00000519682 DCAF13-006 103415412-103427430 protein_coding
  ENST00000521716 DCAF13-005 103415365-103420648 retained_intron
  ENST00000521971 DCAF13-003 103415379-103428717 protein_coding
  ENST00000521999 DCAF13-004 103415385-103440210 protein_coding
  ENST00000611541 DCAF13-007 103439482-103442977 retained_intron
  ENST00000612750 DCAF13-008 103415389-103443453 protein_coding
  ENST00000616836 DCAF13-201 103414714-103443450 protein_coding
  ENST00000618975 DCAF13-202 103415379-103428707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000518554ENST00000519682ENST00000612750ENST00000616836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000518554 N/A 1.407±0.00 N/A N/A 1.669±0.00 0.638±0.00 N/A N/A N/A 0.791±0.00 N/A 2.311±0.00 N/A N/A
ENST00000519682 N/A N/A N/A N/A N/A N/A N/A N/A 5.749±0.00 N/A 2.339±0.00 N/A N/A N/A
ENST00000612750 N/A N/A 5.922±0.00 4.072±0.00 5.350±2.64 5.700±1.37 2.320±0.00 6.045±1.10 3.225±0.59 3.639±0.00 1.831±0.37 25.314±20.50 6.888±1.01 18.940±5.47
ENST00000616836 5.710±0.00 6.792±0.00 N/A 4.086±0.00 4.347±0.00 4.476±0.00 3.948±0.00 4.344±0.00 2.412±0.12 3.460±0.00 N/A N/A 2.665±0.00 6.744±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T6 CIL_0004T6_0002 CGP 8:103371515-103415189
CIL_00060C CIL_00060C_0001 CGP 8:103398635-103443453
CIL_00060F CIL_00060F_0001 CGP 8:103414714-104256094

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006364 IEA rRNA processing
GO:0016567 IEA protein ubiquitination
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002267 dcaf13 ddb1 and cul4 associated factor 13 protein_coding Danio_rerio
ENSMUSG00000022300 Dcaf13 DDB1 and CUL4 associated factor 13 protein_coding Mus_musculus

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