Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	DDB1 and CUL4 associated factor 13
ENSMUST00000022909	Dcaf13-001	ENSMUSG00000022300	10090	+	15:39112865-39146856	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000022909	3.384±0.29	1.267±0.32	13.332±0.13	14.147±0.72	2.061±0.69	2.780±0.51	2.260±0.59	3.555±1.71	8.857±6.77	3.260±1.46	5.434±0.43	7.258±8.44	21.309±7.55	4.235±3.20

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00060C	CIL_00060C_0002	CGP	15:39094191-39146856
CIL_00060F	CIL_00060F_0002	CGP	15:39112865-39681940

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005634	IEA	nucleus
GO:0006364	IEA	rRNA processing
GO:0008150	ND	biological_process
GO:0016567	IEA	protein ubiquitination
GO:0030529	IEA	ribonucleoprotein complex
GO:0044822	IEA	poly(A) RNA binding
GO:0080008	ISS	Cul4-RING E3 ubiquitin ligase complex

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000297579	DCAF13-001	protein_coding	Homo_sapiens	0	1749
ENST00000495256	DCAF13P1-001	processed_pseudogene	Homo_sapiens	0	1266
ENST00000518554	DCAF13-002	retained_intron	Homo_sapiens	0	953
ENST00000519682	DCAF13-006	protein_coding	Homo_sapiens	0	800
ENST00000521716	DCAF13-005	retained_intron	Homo_sapiens	0	370
ENST00000521971	DCAF13-003	protein_coding	Homo_sapiens	0	374
ENST00000521999	DCAF13-004	protein_coding	Homo_sapiens	0	841
ENST00000561147	DCAF13P3-001	processed_pseudogene	Homo_sapiens	0	1391
ENST00000612750	DCAF13-008	protein_coding	Homo_sapiens	0	1749
ENST00000616836	DCAF13-201	protein_coding	Homo_sapiens	0	1749
ENST00000618975	DCAF13-202	protein_coding	Homo_sapiens	0	368

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