C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrilin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022324 Matn2 10090 + 15:34306680-34436242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022947 Matn2-201 34306681-34436242 protein_coding
  ENSMUST00000163455 Matn2-202 34306680-34436238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022947ENSMUST00000163455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022947 23.867±6.24 7.487±4.56 35.241±1.73 2.372±1.71 5.913±2.69 3.840±1.41 3.414±1.32 2.947±0.94 0.765±0.51 1.619±1.09 0.407±0.10 24.162±9.10 1.362±0.71 0.309±0.27
ENSMUST00000163455 21.323±7.09 2.428±0.69 22.668±0.28 0.571±0.05 4.671±3.29 4.337±1.67 3.514±0.00 1.525±0.34 0.707±0.12 1.162±0.66 N/A 9.663±4.57 0.204±0.00 0.341±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0002 CGP 15:34238026-34436242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IDA neuron migration
GO:0005509 IEA calcium ion binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005604 IDA basement membrane
GO:0007411 IGI axon guidance
GO:0008347 IDA glial cell migration
GO:0031012 IEA extracellular matrix
GO:0031104 IMP dendrite regeneration
GO:0031175 IDA neuron projection development
GO:0048678 IMP response to axon injury

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132561 MATN2 matrilin 2 protein_coding Homo_sapiens

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