C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntabulin (syntaxin-interacting)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090057 Sybu-201 ENSMUSG00000022340 10090 - 15:44671859-44788063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000090057
Transcript ID Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000090057 5.290±0.00 0.939±0.00 1.527±0.00 0.076±0.00 0.152±0.00 0.252±0.10 1.496±0.00 0.042±0.04 0.091±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060H CIL_00060H_0002 CGP 15:44619641-44788063
CIL_0005RR CIL_0005RR_0002 CGP 15:44671859-45114934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0008017 ISO microtubule binding
GO:0016021 IEA integral component of membrane
GO:0017075 IEA syntaxin-1 binding
GO:0019894 IEA kinesin binding
GO:0061178 ISO regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0097433 ISO dense body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276646 SYBU-009 protein_coding Homo_sapiens 0 2564
ENST00000399066 SYBU-010 protein_coding Homo_sapiens 0 2484
ENST00000408889 SYBU-201 protein_coding Homo_sapiens 0 2283
ENST00000408908 SYBU-202 protein_coding Homo_sapiens 0 2564
ENST00000422135 SYBU-203 protein_coding Homo_sapiens 0 2575
ENST00000424158 SYBU-002 protein_coding Homo_sapiens 0 2501
ENST00000433638 SYBU-204 protein_coding Homo_sapiens 0 2564
ENST00000440310 SYBU-205 protein_coding Homo_sapiens 0 2564
ENST00000446070 SYBU-005 protein_coding Homo_sapiens 0 2545
ENST00000524720 SYBU-019 protein_coding Homo_sapiens 0 460
ENST00000526736 SYBU-023 retained_intron Homo_sapiens 9e-21 104
ENST00000528045 SYBU-017 protein_coding Homo_sapiens 0 479
ENST00000528331 SYBU-006 protein_coding Homo_sapiens 0 2285
ENST00000528569 SYBU-022 protein_coding Homo_sapiens 0 355
ENST00000528647 SYBU-007 protein_coding Homo_sapiens 0 2545
ENST00000528716 SYBU-016 protein_coding Homo_sapiens 0 348
ENST00000528735 SYBU-026 retained_intron Homo_sapiens 0 204
ENST00000529175 SYBU-012 protein_coding Homo_sapiens 0 2010
ENST00000529190 SYBU-014 protein_coding Homo_sapiens 0 640
ENST00000529690 SYBU-011 protein_coding Homo_sapiens 0 1672
ENST00000531284 SYBU-034 retained_intron Homo_sapiens 0 466
ENST00000532189 SYBU-028 protein_coding Homo_sapiens 0 355
ENST00000532594 SYBU-024 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000532779 SYBU-003 protein_coding Homo_sapiens 0 2281
ENST00000533065 SYBU-008 protein_coding Homo_sapiens 0 2283
ENST00000533171 SYBU-004 protein_coding Homo_sapiens 0 2026
ENST00000533394 SYBU-025 protein_coding Homo_sapiens 0 514
ENST00000533821 SYBU-033 protein_coding Homo_sapiens 0 527
ENST00000533895 SYBU-001 protein_coding Homo_sapiens 0 2545
ENST00000534184 SYBU-031 protein_coding Homo_sapiens 0 350
ENST00000534501 SYBU-020 protein_coding Homo_sapiens 0 497

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