C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc fingers and homeoboxes 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022361 Zhx1 10090 - 15:58047003-58076541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070143 Zhx1-001 58047305-58076469 protein_coding
  ENSMUST00000110168 Zhx1-201 58047003-58076489 protein_coding
  ENSMUST00000175805 Zhx1-006 58047003-58076245 protein_coding
  ENSMUST00000176270 Zhx1-007 58054914-58076363 retained_intron
  ENSMUST00000176713 Zhx1-005 58068660-58076541 retained_intron
  ENSMUST00000177276 Zhx1-002 58052980-58076214 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070143ENSMUST00000110168ENSMUST00000175805ENSMUST00000177276
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070143 8.158±0.42 4.644±0.37 9.212±0.41 9.056±3.28 7.100±1.76 2.823±0.48 2.533±0.17 6.492±0.43 4.159±0.97 6.821±0.64 4.787±0.58 6.318±4.09 3.550±1.80 5.728±0.75
ENSMUST00000110168 N/A 7.145±0.28 1.769±0.01 1.986±0.11 N/A 1.834±0.00 N/A 1.394±0.19 1.155±0.14 1.721±0.11 0.996±0.00 4.020±0.00 0.939±0.00 N/A
ENSMUST00000175805 N/A 6.288±0.00 N/A N/A N/A N/A N/A N/A 1.930±0.39 N/A N/A 2.787±0.44 N/A N/A
ENSMUST00000177276 N/A N/A N/A N/A N/A N/A 1.432±0.27 N/A N/A N/A N/A N/A N/A 3.722±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SN CIL_0002SN_0002 CGP 15:58022259-58076425
CIL_000590 CIL_000590_0002 CGP 15:58028243-58076541
CIL_000591 CIL_000591_0002 CGP 15:58047003-58135082

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IEA:IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165156 ZHX1 zinc fingers and homeoboxes 1 protein_coding Homo_sapiens

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