C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc fingers and homeoboxes 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110168 Zhx1-201 ENSMUSG00000022361 10090 - 15:58047003-58076489 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110168
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110168 7.145±0.28 1.769±0.01 1.986±0.11 1.834±0.00 1.394±0.19 1.155±0.14 1.721±0.11 0.996±0.00 4.020±0.00 0.939±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SN CIL_0002SN_0002 CGP 15:58022259-58076425
CIL_000590 CIL_000590_0002 CGP 15:58028243-58076541
CIL_000591 CIL_000591_0002 CGP 15:58047003-58135082

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IEA:IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297857 ZHX1-201 protein_coding Homo_sapiens 0 3890
ENST00000395571 ZHX1-001 protein_coding Homo_sapiens 0 3890
ENST00000522595 ZHX1-005 processed_transcript Homo_sapiens 0 758
ENST00000522655 ZHX1-003 protein_coding Homo_sapiens 0 3709
ENST00000602651 ZHX1-004 protein_coding Homo_sapiens 5.60519e-45 185
ENST00000622816 ZHX1-C8orf76-201 protein_coding Homo_sapiens 0 209

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