C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000590_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000259305-ENSG00000165156 CGP 9606 8:123226189-123275541
GeneTranscriptPositionBiotype
ENSG00000165156 (ZHX1)
zinc fingers and homeoboxes 1 		ENST00000297857 (ZHX1-201) 123248451-123274487 protein_coding
ENST00000395571 (ZHX1-001) 123248456-123274495 protein_coding
ENST00000480132 (ZHX1-007) 123256120-123274266 processed_transcript
ENST00000517516 (ZHX1-002) 123249660-123267391 processed_transcript
ENST00000522595 (ZHX1-005) 123255535-123274484 processed_transcript
ENST00000522655 (ZHX1-003) 123250130-123275541 protein_coding
ENST00000524267 (ZHX1-006) 123255920-123273997 processed_transcript
ENST00000602651 (ZHX1-004) 123252429-123253442 protein_coding
ENSG00000189376 (C8orf76)
chromosome 8 open reading frame 76 		ENST00000276704 (C8orf76-001) 123219957-123241398 protein_coding
ENST00000517760 (C8orf76-008) 123226360-123231592 processed_transcript
ENST00000518996 (C8orf76-005) 123231404-123239386 retained_intron
ENST00000519791 (C8orf76-004) 123220195-123241286 processed_transcript
ENST00000521310 (C8orf76-007) 123226498-123241344 processed_transcript
ENST00000522477 (C8orf76-003) 123239640-123241377 processed_transcript
ENST00000523726 (C8orf76-006) 123238569-123241355 retained_intron
ENSG00000222607 (RNU6-628P)
RNA, U6 small nuclear 628, pseudogene 		ENST00000410675 (RNU6-628P-201) 123262843-123262949 snRNA
ENSG00000243498 (UBA52P5)
ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 5 		ENST00000461723 (UBA52P5-001) 123236852-123237062 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_000590_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022362-ENSMUSG00000022361 CGP 10090 15:58028243-58076541
GeneTranscriptPositionBiotype
ENSMUSG00000022361 (Zhx1)
zinc fingers and homeoboxes 1 		ENSMUST00000070143 (Zhx1-001) 58047305-58076469 protein_coding
ENSMUST00000110168 (Zhx1-201) 58047003-58076489 protein_coding
ENSMUST00000175805 (Zhx1-006) 58047003-58076245 protein_coding
ENSMUST00000176270 (Zhx1-007) 58054914-58076363 retained_intron
ENSMUST00000176713 (Zhx1-005) 58068660-58076541 retained_intron
ENSMUST00000177276 (Zhx1-002) 58052980-58076214 protein_coding
ENSMUSG00000064597 (Gm22299)
predicted gene, 22299 		ENSMUST00000082663 (Gm22299-201) 58041516-58041651 snoRNA
ENSMUSG00000101892 (9130401M01Rik)
RIKEN cDNA 9130401M01 gene 		ENSMUST00000100655 (9130401M01Rik-001) 58022259-58034315 protein_coding
ENSMUST00000185553 (9130401M01Rik-003) 58030956-58034325 protein_coding
ENSMUST00000187062 (9130401M01Rik-004) 58022270-58027895 processed_transcript
ENSMUST00000189159 (9130401M01Rik-002) 58028812-58034190 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000590_0001ENSG00000165156ENST00000297857ENST00000395571ENST00000480132ENST00000517516ENST00000522595ENST00000522655ENST00000524267ENST00000602651ENSG00000189376ENST00000276704ENST00000517760ENST00000518996ENST00000519791ENST00000521310ENST00000522477ENST00000523726ENSG00000222607ENST00000410675ENSG00000243498ENST00000461723CIL_000590_0002ENSMUSG00000022361ENSMUST00000070143ENSMUST00000110168ENSMUST00000175805ENSMUST00000176270ENSMUST00000176713ENSMUST00000177276ENSMUSG00000064597ENSMUST00000082663ENSMUSG00000101892ENSMUST00000100655ENSMUST00000185553ENSMUST00000187062ENSMUST00000189159
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000590_0001ENSG00000165156ENST00000297857ENST00000395571ENST00000522655ENSG00000189376ENST00000276704ENST00000517760ENSG00000222607ENST00000410675ENSG00000243498ENST00000461723CIL_000590_0002ENSMUSG00000022361ENSMUST00000070143ENSMUST00000110168ENSMUST00000175805ENSMUST00000177276ENSMUSG00000064597ENSMUST00000082663ENSMUSG00000101892ENSMUST00000100655
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165156 ENST00000297857 3.420±0.00 N/A N/A N/A 4.506±0.00 1.485±0.00 1.017±0.50 1.129±0.00 2.215±0.70 4.629±0.00 1.531±0.00 2.532±0.28 1.303±0.41 4.202±2.99
ENST00000395571 4.660±0.00 3.021±0.00 1.297±0.00 3.874±0.00 6.173±2.86 3.048±0.00 0.855±0.26 9.902±0.00 1.395±0.19 1.453±0.00 N/A 2.713±0.86 1.460±0.55 1.920±0.00
ENST00000480132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522655 N/A N/A 2.026±0.00 7.903±0.00 N/A 2.483±0.06 1.886±0.95 2.845±0.00 N/A N/A 1.734±0.36 1.536±0.09 N/A 4.052±0.00
ENST00000524267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189376 ENST00000276704 N/A 6.884±0.00 N/A N/A N/A 4.721±0.00 N/A N/A N/A N/A 3.900±0.45 9.676±1.40 7.085±1.30 10.575±0.00
ENST00000517760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.044±0.00 11.450±0.00 N/A
ENST00000518996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222607 ENST00000410675 N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A
ENSG00000243498 ENST00000461723 0.341±0.00 1.120±0.00 N/A 0.285±0.00 0.407±0.00 0.246±0.00 0.113±0.00 0.398±0.00 N/A 0.506±0.00 0.539±0.00 1.510±1.17 N/A 0.450±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022361 ENSMUST00000070143 8.158±0.42 4.644±0.37 9.212±0.41 9.056±3.28 7.100±1.76 2.823±0.48 2.533±0.17 6.492±0.43 4.159±0.97 6.821±0.64 4.787±0.58 6.318±4.09 3.550±1.80 5.728±0.75
ENSMUST00000110168 N/A 7.145±0.28 1.769±0.01 1.986±0.11 N/A 1.834±0.00 N/A 1.394±0.19 1.155±0.14 1.721±0.11 0.996±0.00 4.020±0.00 0.939±0.00 N/A
ENSMUST00000175805 N/A 6.288±0.00 N/A N/A N/A N/A N/A N/A 1.930±0.39 N/A N/A 2.787±0.44 N/A N/A
ENSMUST00000176270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177276 N/A N/A N/A N/A N/A N/A 1.432±0.27 N/A N/A N/A N/A N/A N/A 3.722±0.55
ENSMUSG00000064597 ENSMUST00000082663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.617±6.63 N/A
ENSMUSG00000101892 ENSMUST00000100655 18.834±4.46 11.727±3.86 13.557±0.98 21.929±2.82 12.903±3.71 7.403±2.57 4.612±0.86 9.410±2.47 9.096±2.74 10.498±1.34 9.693±1.57 15.887±7.19 20.052±6.69 3.186±0.00
ENSMUST00000185553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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