C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: l(3)mbt-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023029 L3mbtl2-001 ENSMUSG00000022394 10090 + 15:81663889-81688315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023029 4.950±0.63 4.098±0.70 8.446±0.70 6.924±1.02 4.800±0.71 3.459±0.41 2.419±0.20 3.904±0.23 5.363±2.83 4.013±0.46 3.138±0.40 4.837±1.49 9.910±4.66 8.697±2.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0002 CGP 15:81585351-81688315
CIL_0000VA CIL_0000VA_0003 CGP 15:81663889-81697287

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0035064 ISS methylated histone binding
GO:0042393 IEA histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086087 MBTD1-201 protein_coding Danio_rerio 0 196
ENST00000216237 L3MBTL2-001 protein_coding Homo_sapiens 0 2490
ENST00000449635 L3MBTL2-008 protein_coding Homo_sapiens 0 704
ENST00000450939 L3MBTL2-009 nonsense_mediated_decay Homo_sapiens 0 691
ENST00000452106 L3MBTL2-005 nonsense_mediated_decay Homo_sapiens 0 2289
ENST00000466589 L3MBTL2-004 retained_intron Homo_sapiens 0 2305
ENST00000479978 L3MBTL2-002 retained_intron Homo_sapiens 0 1567
ENST00000481902 L3MBTL2-003 retained_intron Homo_sapiens 0 2019
ENST00000489136 L3MBTL2-006 processed_transcript Homo_sapiens 0 665

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