C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphomannomutase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022474 Pmm1 10090 - 15:81951108-81960930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023112 Pmm1-001 81951108-81960930 protein_coding
  ENSMUST00000071462 Pmm1-002 81951108-81960869 protein_coding
  ENSMUST00000125593 Pmm1-007 81951547-81952264 retained_intron
  ENSMUST00000129406 Pmm1-006 81951402-81953504 retained_intron
  ENSMUST00000147442 Pmm1-005 81957341-81960764 retained_intron
  ENSMUST00000147645 Pmm1-003 81955554-81960833 retained_intron
  ENSMUST00000155781 Pmm1-004 81951444-81960842 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023112ENSMUST00000071462ENSMUST00000129406ENSMUST00000147645ENSMUST00000155781
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023112 47.928±7.93 50.127±6.01 42.431±6.65 56.785±45.21 46.980±13.26 23.019±1.20 10.246±1.75 21.925±1.11 9.249±8.51 17.551±0.90 9.295±1.12 37.831±4.81 26.559±10.63 6.095±0.54
ENSMUST00000071462 N/A N/A N/A 80.580±0.00 N/A N/A N/A N/A N/A N/A N/A 12.299±0.00 17.219±10.55 N/A
ENSMUST00000129406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.758±0.00 N/A
ENSMUST00000147645 N/A N/A N/A N/A N/A N/A 4.361±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.647±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023C CIL_00023C_0002 CGP 15:81936759-81960930

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004615 ISS phosphomannomutase activity
GO:0005737 IDA cytoplasm
GO:0006013 ISS mannose metabolic process
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0019307 IEA mannose biosynthetic process
GO:0043025 IDA neuronal cell body
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038398 PMM1 phosphomannomutase 1 protein_coding Danio_rerio
ENSG00000100417 PMM1 phosphomannomutase 1 protein_coding Homo_sapiens

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