C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphomannomutase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023112 Pmm1-001 ENSMUSG00000022474 10090 - 15:81951108-81960930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023112 47.928±7.93 50.127±6.01 42.431±6.65 56.785±45.21 46.980±13.26 23.019±1.20 10.246±1.75 21.925±1.11 9.249±8.51 17.551±0.90 9.295±1.12 37.831±4.81 26.559±10.63 6.095±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023C CIL_00023C_0002 CGP 15:81936759-81960930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004615 ISS phosphomannomutase activity
GO:0005737 IDA cytoplasm
GO:0006013 ISS mannose metabolic process
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0019307 IEA mannose biosynthetic process
GO:0043025 IDA neuronal cell body
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216259 PMM1-001 protein_coding Homo_sapiens 0 1075
ENST00000414636 PMM1-006 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000466645 PMM1-009 processed_transcript Homo_sapiens 3e-21 106
ENST00000472620 PMM1-002 retained_intron Homo_sapiens 0 547
ENST00000478337 PMM1-008 retained_intron Homo_sapiens 0 383
ENST00000482178 PMM1-004 retained_intron Homo_sapiens 0 547
ENST00000485648 PMM1-003 retained_intron Homo_sapiens 0 547
ENST00000493389 PMM1-007 retained_intron Homo_sapiens 4e-31 139

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