C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172346-ENSG00000100417 CGP 9606 22:41560763-41589890
GeneTranscriptPositionBiotype
ENSG00000100417 (PMM1)
phosphomannomutase 1 		ENST00000216259 (PMM1-001) 41576894-41589890 protein_coding
ENST00000414636 (PMM1-006) 41584020-41589847 nonsense_mediated_decay
ENST00000463617 (PMM1-005) 41576903-41580689 retained_intron
ENST00000466645 (PMM1-009) 41583983-41589796 processed_transcript
ENST00000472620 (PMM1-002) 41576931-41589871 retained_intron
ENST00000478337 (PMM1-008) 41584006-41589825 retained_intron
ENST00000482178 (PMM1-004) 41576903-41585402 retained_intron
ENST00000485648 (PMM1-003) 41576937-41589818 retained_intron
ENST00000493389 (PMM1-007) 41586106-41589829 retained_intron
ENSG00000172346 (CSDC2)
cold shock domain containing C2, RNA binding 		ENST00000306149 (CSDC2-001) 41560763-41576666 protein_coding
ENST00000460790 (CSDC2-003) 41572017-41577741 protein_coding
CIL_00023C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042109-ENSMUSG00000022474 CGP 10090 15:81936759-81960930
GeneTranscriptPositionBiotype
ENSMUSG00000022474 (Pmm1)
phosphomannomutase 1 		ENSMUST00000023112 (Pmm1-001) 81951108-81960930 protein_coding
ENSMUST00000071462 (Pmm1-002) 81951108-81960869 protein_coding
ENSMUST00000125593 (Pmm1-007) 81951547-81952264 retained_intron
ENSMUST00000129406 (Pmm1-006) 81951402-81953504 retained_intron
ENSMUST00000147442 (Pmm1-005) 81957341-81960764 retained_intron
ENSMUST00000147645 (Pmm1-003) 81955554-81960833 retained_intron
ENSMUST00000155781 (Pmm1-004) 81951444-81960842 nonsense_mediated_decay
ENSMUSG00000042109 (Csdc2)
cold shock domain containing C2, RNA binding 		ENSMUST00000038757 (Csdc2-001) 81936759-81950941 protein_coding
ENSMUST00000135663 (Csdc2-003) 81936982-81946869 protein_coding
ENSMUST00000140209 (Csdc2-004) 81945731-81946887 processed_transcript
ENSMUST00000152678 (Csdc2-002) 81946961-81950934 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023C_0001ENSG00000100417ENST00000216259ENST00000414636ENST00000463617ENST00000466645ENST00000472620ENST00000478337ENST00000482178ENST00000485648ENST00000493389ENSG00000172346ENST00000306149ENST00000460790CIL_00023C_0002ENSMUSG00000022474ENSMUST00000023112ENSMUST00000071462ENSMUST00000125593ENSMUST00000129406ENSMUST00000147442ENSMUST00000147645ENSMUST00000155781ENSMUSG00000042109ENSMUST00000038757ENSMUST00000135663ENSMUST00000140209ENSMUST00000152678
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023C_0001ENSG00000100417ENST00000216259ENST00000463617ENST00000482178ENST00000485648ENST00000493389ENSG00000172346ENST00000306149CIL_00023C_0002ENSMUSG00000022474ENSMUST00000023112ENSMUST00000071462ENSMUST00000129406ENSMUST00000147645ENSMUST00000155781ENSMUSG00000042109ENSMUST00000038757ENSMUST00000140209ENSMUST00000152678
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100417 ENST00000216259 36.014±0.00 8.497±0.00 3.288±0.00 18.182±10.32 13.294±12.50 14.029±11.82 1.042±0.00 25.164±18.08 13.222±10.46 9.008±7.12 8.566±0.00 25.994±14.70 18.980±4.92 39.320±9.31
ENST00000414636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463617 N/A N/A N/A N/A N/A 0.566±0.00 N/A N/A N/A N/A N/A 0.911±0.00 N/A N/A
ENST00000466645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482178 N/A N/A N/A N/A N/A 0.625±0.00 N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A
ENST00000485648 N/A 2.117±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493389 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A
ENSG00000172346 ENST00000306149 N/A 2.025±0.00 1.366±0.00 3.141±2.25 N/A 2.954±0.00 27.707±25.95 12.436±0.00 0.207±0.00 5.174±4.73 0.540±0.33 53.804±38.45 2.187±0.00 13.184±0.75
ENST00000460790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022474 ENSMUST00000023112 47.928±7.93 50.127±6.01 42.431±6.65 56.785±45.21 46.980±13.26 23.019±1.20 10.246±1.75 21.925±1.11 9.249±8.51 17.551±0.90 9.295±1.12 37.831±4.81 26.559±10.63 6.095±0.54
ENSMUST00000071462 N/A N/A N/A 80.580±0.00 N/A N/A N/A N/A N/A N/A N/A 12.299±0.00 17.219±10.55 N/A
ENSMUST00000125593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.758±0.00 N/A
ENSMUST00000147442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147645 N/A N/A N/A N/A N/A N/A 4.361±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.647±0.00 N/A
ENSMUSG00000042109 ENSMUST00000038757 6.914±5.55 16.127±4.14 11.132±1.21 33.660±18.80 2.057±0.40 4.295±0.54 29.050±0.74 1.961±0.25 0.363±0.18 3.378±0.14 0.452±0.08 17.814±7.02 0.618±0.42 2.986±1.19
ENSMUST00000135663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A
ENSMUST00000152678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.687±0.11 0.042±0.02 0.193±0.00

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