C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gametocyte specific factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022487 Gtsf1 10090 - 15:103402405-103430470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023129 Gtsf1-001 103402405-103430470 protein_coding
  ENSMUST00000123724 Gtsf1-009 103402458-103428606 protein_coding
  ENSMUST00000129837 Gtsf1-006 103419968-103430244 protein_coding
  ENSMUST00000136480 Gtsf1-002 103402458-103428500 protein_coding
  ENSMUST00000141364 Gtsf1-005 103402514-103430379 protein_coding
  ENSMUST00000146675 Gtsf1-007 103402495-103430344 protein_coding
  ENSMUST00000146736 Gtsf1-008 103402461-103429562 protein_coding
  ENSMUST00000147389 Gtsf1-003 103409626-103430409 protein_coding
  ENSMUST00000153930 Gtsf1-004 103402483-103430349 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000023129ENSMUST00000129837ENSMUST00000136480ENSMUST00000141364ENSMUST00000146675ENSMUST00000146736ENSMUST00000147389ENSMUST00000153930
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000023129 N/A 0.010±0.00 N/A N/A 0.153±0.07 0.084±0.01 N/A 0.744±0.41 0.027±0.00 126.556±16.82
ENSMUST00000129837 N/A 0.051±0.00 0.140±0.00 N/A N/A 0.124±0.00 0.019±0.00 0.496±0.00 0.066±0.00 N/A
ENSMUST00000136480 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A
ENSMUST00000141364 N/A 0.013±0.00 N/A 0.102±0.00 N/A N/A 0.006±0.00 5.160±3.83 0.418±0.00 185.941±200.38
ENSMUST00000146675 N/A N/A N/A N/A N/A N/A N/A 0.897±0.45 N/A N/A
ENSMUST00000146736 N/A N/A N/A N/A 0.193±0.08 0.118±0.00 0.006±0.00 1.249±0.46 0.037±0.00 N/A
ENSMUST00000147389 N/A N/A N/A N/A 0.163±0.06 N/A N/A N/A N/A N/A
ENSMUST00000153930 N/A N/A N/A N/A N/A N/A N/A 1.534±0.51 0.077±0.05 44.651±4.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003E CIL_00003E_0002 CGP 15:103344289-103430470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000887 GTSF1L gametocyte specific factor 1 protein_coding Danio_rerio
ENSG00000170627 GTSF1 gametocyte specific factor 1 protein_coding Homo_sapiens

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