C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gametocyte specific factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141364 Gtsf1-005 ENSMUSG00000022487 10090 - 15:103402514-103430379 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENSMUST00000141364
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENSMUST00000141364 0.013±0.00 0.102±0.00 0.006±0.00 5.160±3.83 0.418±0.00 185.941±200.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003E CIL_00003E_0002 CGP 15:103344289-103430470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305879 GTSF1-001 protein_coding Homo_sapiens 0 691
ENST00000546575 GTSF1-005 retained_intron Homo_sapiens 0 520
ENST00000546739 GTSF1-003 retained_intron Homo_sapiens 7e-37 158
ENST00000546931 GTSF1-006 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000548538 GTSF1-008 processed_transcript Homo_sapiens 4e-30 135
ENST00000552395 GTSF1-004 processed_transcript Homo_sapiens 0 534
ENST00000552397 GTSF1-002 protein_coding Homo_sapiens 0 691

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