C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4930562C15 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022518 4930562C15Rik 10090 + 16:4835416-4867691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100211 4930562C15Rik-201 4835416-4867691 protein_coding
  ENSMUST00000171105 4930562C15Rik-004 4858254-4867621 protein_coding
  ENSMUST00000175762 4930562C15Rik-007 4861573-4867349 nonsense_mediated_decay
  ENSMUST00000175836 4930562C15Rik-002 4841107-4852129 non_stop_decay
  ENSMUST00000176394 4930562C15Rik-006 4858254-4867621 nonsense_mediated_decay
  ENSMUST00000176982 4930562C15Rik-005 4858254-4867621 nonsense_mediated_decay
  ENSMUST00000177042 4930562C15Rik-001 4835416-4852123 non_stop_decay
  ENSMUST00000180566 4930562C15Rik-003 4850735-4861062 protein_coding
  ENSMUST00000180939 4930562C15Rik-008 4864323-4865178 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100211ENSMUST00000171105ENSMUST00000175762ENSMUST00000175836ENSMUST00000176394ENSMUST00000176982ENSMUST00000177042ENSMUST00000180566ENSMUST00000180939
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100211 N/A N/A N/A N/A N/A N/A N/A N/A 1.093±0.25 N/A N/A 0.030±0.00 14.905±1.00
ENSMUST00000171105 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 1.733±0.00 N/A 1.045±0.67 N/A N/A
ENSMUST00000175762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A
ENSMUST00000175836 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000176394 N/A 0.158±0.11 0.134±0.00 0.438±0.18 0.383±0.00 0.121±0.07 0.085±0.03 0.067±0.06 N/A 0.046±0.00 2.161±0.00 0.274±0.16 N/A
ENSMUST00000176982 N/A N/A N/A N/A N/A 0.124±0.00 0.022±0.00 N/A N/A N/A 0.592±0.48 N/A 7.972±1.19
ENSMUST00000177042 N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 132.118±0.00
ENSMUST00000180939 2.035±1.36 1.725±0.45 0.179±0.00 1.726±0.51 1.654±0.03 0.583±0.19 0.801±0.49 0.190±0.18 N/A 0.077±0.03 3.453±0.57 0.293±0.16 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000108 CIL_000108_0002 CGP 16:4750348-4867691
CIL_00010C CIL_00010C_0002 CGP 16:4835416-4880315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205832 C16orf96 chromosome 16 open reading frame 96 protein_coding Homo_sapiens

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