C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00010C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205832-ENSG00000153443 CGP 9606 16:4556490-4615027
GeneTranscriptPositionBiotype
ENSG00000153443 (UBALD1)
UBA-like domain containing 1
ENST00000283474 (UBALD1-001) 4608883-4614926 protein_coding
ENST00000587615 (UBALD1-013) 4609368-4614872 protein_coding
ENST00000587649 (UBALD1-010) 4609721-4614873 protein_coding
ENST00000588691 (UBALD1-012) 4608884-4614876 non_stop_decay
ENST00000590891 (UBALD1-005) 4608883-4611523 protein_coding
ENST00000590965 (UBALD1-003) 4608883-4614874 protein_coding
ENST00000591113 (UBALD1-011) 4609831-4614402 protein_coding
ENST00000591401 (UBALD1-002) 4608883-4614881 protein_coding
ENST00000591897 (UBALD1-004) 4608883-4615027 protein_coding
ENSG00000205832 (C16orf96)
chromosome 16 open reading frame 96
ENST00000444310 (C16orf96-001) 4556490-4600714 protein_coding
ENSG00000261612 (SUB1P3)
SUB1 pseudogene 3
ENST00000564581 (SUB1P3-001) 4562814-4563128 processed_pseudogene
ENSG00000261789 (RP11-709D24.5)
ENST00000563704 (RP11-709D24.5-001) 4560001-4561662 antisense
CIL_00010C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022518-ENSMUSG00000039568 CGP 10090 16:4835416-4880315
GeneTranscriptPositionBiotype
ENSMUSG00000022518 (4930562C15Rik)
RIKEN cDNA 4930562C15 gene
ENSMUST00000100211 (4930562C15Rik-201) 4835416-4867691 protein_coding
ENSMUST00000171105 (4930562C15Rik-004) 4858254-4867621 protein_coding
ENSMUST00000175762 (4930562C15Rik-007) 4861573-4867349 nonsense_mediated_decay
ENSMUST00000175836 (4930562C15Rik-002) 4841107-4852129 non_stop_decay
ENSMUST00000176394 (4930562C15Rik-006) 4858254-4867621 nonsense_mediated_decay
ENSMUST00000176982 (4930562C15Rik-005) 4858254-4867621 nonsense_mediated_decay
ENSMUST00000177042 (4930562C15Rik-001) 4835416-4852123 non_stop_decay
ENSMUST00000180566 (4930562C15Rik-003) 4850735-4861062 protein_coding
ENSMUST00000180939 (4930562C15Rik-008) 4864323-4865178 retained_intron
ENSMUSG00000039568 (Ubald1)
UBA-like domain containing 1
ENSMUST00000037843 (Ubald1-001) 4874778-4880315 protein_coding
ENSMUST00000143873 (Ubald1-002) 4874788-4879805 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010C_0001ENSG00000153443ENST00000283474ENST00000587615ENST00000587649ENST00000588691ENST00000590891ENST00000590965ENST00000591113ENST00000591401ENST00000591897ENSG00000205832ENST00000444310ENSG00000261612ENST00000564581ENSG00000261789ENST00000563704CIL_00010C_0002ENSMUSG00000022518ENSMUST00000100211ENSMUST00000171105ENSMUST00000175762ENSMUST00000175836ENSMUST00000176394ENSMUST00000176982ENSMUST00000177042ENSMUST00000180566ENSMUST00000180939ENSMUSG00000039568ENSMUST00000037843ENSMUST00000143873
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010C_0001ENSG00000153443ENST00000283474ENST00000587615ENST00000587649ENST00000588691ENST00000590891ENST00000590965ENST00000591401ENST00000591897ENSG00000205832ENST00000444310ENSG00000261612ENST00000564581ENSG00000261789ENST00000563704CIL_00010C_0002ENSMUSG00000022518ENSMUST00000100211ENSMUST00000171105ENSMUST00000175762ENSMUST00000175836ENSMUST00000176394ENSMUST00000176982ENSMUST00000177042ENSMUST00000180566ENSMUST00000180939ENSMUSG00000039568ENSMUST00000037843ENSMUST00000143873
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153443 ENST00000283474 8.805±0.00 3.601±0.00 0.533±0.00 7.544±6.38 4.786±0.00 6.397±0.00 9.046±0.00 7.575±0.00 1.844±1.65 4.786±0.00 4.697±0.00 12.423±1.64 26.290±3.40 3.418±0.00
ENST00000587615 N/A 6.400±0.00 N/A 11.590±0.00 5.230±4.84 3.644±3.20 N/A 9.168±0.00 3.733±0.00 N/A 8.450±0.00 12.522±4.66 14.186±0.00 8.848±2.06
ENST00000587649 N/A N/A N/A N/A N/A 5.114±4.59 0.169±0.00 2.141±0.00 N/A 0.225±0.00 N/A N/A N/A N/A
ENST00000588691 N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A 0.342±0.00 2.839±0.00 N/A N/A N/A
ENST00000590891 N/A 1.256±0.00 N/A 0.182±0.00 N/A 2.624±0.00 0.965±0.00 1.735±0.00 N/A 1.658±0.00 N/A 0.820±0.63 N/A N/A
ENST00000590965 N/A N/A N/A N/A N/A 2.767±0.00 N/A N/A N/A N/A N/A N/A N/A 3.029±0.00
ENST00000591113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591401 5.781±0.00 N/A 1.090±0.00 N/A 7.914±0.00 N/A N/A N/A 7.441±0.00 12.516±0.00 8.037±0.00 N/A N/A 10.058±0.00
ENST00000591897 N/A N/A N/A N/A 0.479±0.00 N/A 0.158±0.00 0.659±0.00 N/A N/A 0.104±0.00 30.600±0.00 13.955±8.09 21.020±0.00
ENSG00000205832 ENST00000444310 0.023±0.00 0.111±0.00 0.060±0.00 0.216±0.13 0.014±0.00 N/A 0.017±0.00 0.122±0.08 0.027±0.01 0.051±0.00 0.189±0.10 0.051±0.02 0.058±0.03 10.331±4.78
ENSG00000261612 ENST00000564581 0.039±0.00 0.125±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00
ENSG00000261789 ENST00000563704 0.369±0.00 1.091±0.00 N/A 0.418±0.00 N/A N/A 0.082±0.00 0.422±0.00 0.083±0.00 0.280±0.00 0.077±0.00 0.037±0.00 0.033±0.00 0.310±0.24
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022518 ENSMUST00000100211 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.093±0.25 N/A N/A 0.030±0.00 14.905±1.00
ENSMUST00000171105 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 1.733±0.00 N/A 1.045±0.67 N/A N/A
ENSMUST00000175762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A
ENSMUST00000175836 N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000176394 N/A 0.158±0.11 N/A 0.134±0.00 0.438±0.18 0.383±0.00 0.121±0.07 0.085±0.03 0.067±0.06 N/A 0.046±0.00 2.161±0.00 0.274±0.16 N/A
ENSMUST00000176982 N/A N/A N/A N/A N/A N/A 0.124±0.00 0.022±0.00 N/A N/A N/A 0.592±0.48 N/A 7.972±1.19
ENSMUST00000177042 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 132.118±0.00
ENSMUST00000180939 2.035±1.36 1.725±0.45 N/A 0.179±0.00 1.726±0.51 1.654±0.03 0.583±0.19 0.801±0.49 0.190±0.18 N/A 0.077±0.03 3.453±0.57 0.293±0.16 N/A
ENSMUSG00000039568 ENSMUST00000037843 16.630±1.01 18.233±0.61 11.783±2.90 12.131±5.12 17.318±7.80 16.952±1.25 5.651±1.70 11.089±2.12 4.919±0.47 19.241±2.51 17.074±1.41 13.410±3.95 13.456±7.83 21.054±9.76
ENSMUST00000143873 2.695±0.62 1.838±0.12 2.624±0.30 1.480±0.19 3.044±0.24 2.237±0.33 1.318±0.14 1.366±0.24 0.732±0.22 3.730±0.23 1.010±0.19 2.693±0.66 1.110±0.31 3.249±0.29

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