C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000108_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089486-ENSG00000205832 CGP 9606 16:4510675-4600714
GeneTranscriptPositionBiotype
ENSG00000089486 (CDIP1)
cell death-inducing p53 target 1 		ENST00000399599 (CDIP1-005) 4510739-4515109 protein_coding
ENST00000562334 (CDIP1-007) 4511933-4538773 protein_coding
ENST00000562579 (CDIP1-012) 4512454-4538775 protein_coding
ENST00000563186 (CDIP1-011) 4512867-4514664 protein_coding
ENST00000563332 (CDIP1-004) 4510675-4538470 protein_coding
ENST00000563507 (CDIP1-002) 4511806-4538784 protein_coding
ENST00000564828 (CDIP1-006) 4511421-4538828 protein_coding
ENST00000566234 (CDIP1-015) 4514045-4522525 protein_coding
ENST00000567695 (CDIP1-001) 4511324-4538784 protein_coding
ENST00000586728 (CDIP1-014) 4513694-4538404 protein_coding
ENST00000586768 (CDIP1-016) 4523827-4538773 processed_transcript
ENST00000588381 (CDIP1-013) 4512916-4538469 protein_coding
ENST00000589159 (CDIP1-018) 4512399-4514664 nonsense_mediated_decay
ENST00000589890 (CDIP1-017) 4512798-4514149 protein_coding
ENSG00000205832 (C16orf96)
chromosome 16 open reading frame 96 		ENST00000444310 (C16orf96-001) 4556490-4600714 protein_coding
ENSG00000261612 (SUB1P3)
SUB1 pseudogene 3 		ENST00000564581 (SUB1P3-001) 4562814-4563128 processed_pseudogene
ENSG00000261789 (RP11-709D24.5)
 ENST00000563704 (RP11-709D24.5-001) 4560001-4561662 antisense
ENSG00000278434 (RP11-709D24.8)
 ENST00000612995 (RP11-709D24.8-001) 4532216-4533670 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_000108_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004071-ENSMUSG00000022518 CGP 10090 16:4750348-4867691
GeneTranscriptPositionBiotype
ENSMUSG00000004070 (Hmox2)
heme oxygenase (decycling) 2 		ENSMUST00000004172 (Hmox2-001) 4726363-4766742 protein_coding
ENSMUST00000118885 (Hmox2-003) 4756903-4766245 protein_coding
ENSMUST00000120232 (Hmox2-002) 4741581-4766249 protein_coding
ENSMUST00000121529 (Hmox2-005) 4756994-4765090 protein_coding
ENSMUST00000140367 (Hmox2-004) 4756845-4764684 protein_coding
ENSMUST00000154117 (Hmox2-006) 4726361-4764848 protein_coding
ENSMUSG00000004071 (Cdip1)
cell death inducing Trp53 target 1 		ENSMUST00000004173 (Cdip1-001) 4765461-4789990 protein_coding
ENSMUST00000117713 (Cdip1-005) 4767339-4789930 protein_coding
ENSMUST00000118703 (Cdip1-003) 4766841-4790292 protein_coding
ENSMUST00000140187 (Cdip1-004) 4766841-4771512 retained_intron
ENSMUST00000147225 (Cdip1-002) 4750348-4770097 protein_coding
ENSMUST00000152667 (Cdip1-006) 4769309-4790266 retained_intron
ENSMUSG00000022518 (4930562C15Rik)
RIKEN cDNA 4930562C15 gene 		ENSMUST00000100211 (4930562C15Rik-201) 4835416-4867691 protein_coding
ENSMUST00000171105 (4930562C15Rik-004) 4858254-4867621 protein_coding
ENSMUST00000175762 (4930562C15Rik-007) 4861573-4867349 nonsense_mediated_decay
ENSMUST00000175836 (4930562C15Rik-002) 4841107-4852129 non_stop_decay
ENSMUST00000176394 (4930562C15Rik-006) 4858254-4867621 nonsense_mediated_decay
ENSMUST00000176982 (4930562C15Rik-005) 4858254-4867621 nonsense_mediated_decay
ENSMUST00000177042 (4930562C15Rik-001) 4835416-4852123 non_stop_decay
ENSMUST00000180566 (4930562C15Rik-003) 4850735-4861062 protein_coding
ENSMUST00000180939 (4930562C15Rik-008) 4864323-4865178 retained_intron
ENSMUSG00000086464 (Gm15835)
predicted gene 15835 		ENSMUST00000127697 (Gm15835-001) 4777743-4779454 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000108_0001ENSG00000089486ENST00000399599ENST00000562334ENST00000562579ENST00000563186ENST00000563332ENST00000563507ENST00000564828ENST00000566234ENST00000567695ENST00000586728ENST00000586768ENST00000588381ENST00000589159ENST00000589890ENSG00000205832ENST00000444310ENSG00000261612ENST00000564581ENSG00000261789ENST00000563704ENSG00000278434ENST00000612995CIL_000108_0002ENSMUSG00000004070ENSMUST00000004172ENSMUST00000118885ENSMUST00000120232ENSMUST00000121529ENSMUST00000140367ENSMUST00000154117ENSMUSG00000004071ENSMUST00000004173ENSMUST00000117713ENSMUST00000118703ENSMUST00000140187ENSMUST00000147225ENSMUST00000152667ENSMUSG00000022518ENSMUST00000100211ENSMUST00000171105ENSMUST00000175762ENSMUST00000175836ENSMUST00000176394ENSMUST00000176982ENSMUST00000177042ENSMUST00000180566ENSMUST00000180939ENSMUSG00000086464ENSMUST00000127697
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000108_0001ENSG00000089486ENST00000399599ENST00000562334ENST00000563332ENST00000563507ENST00000564828ENST00000567695ENST00000588381ENST00000589159ENSG00000205832ENST00000444310ENSG00000261612ENST00000564581ENSG00000261789ENST00000563704ENSG00000278434ENST00000612995CIL_000108_0002ENSMUSG00000004070ENSMUST00000004172ENSMUST00000120232ENSMUST00000121529ENSMUSG00000004071ENSMUST00000004173ENSMUST00000117713ENSMUST00000118703ENSMUST00000140187ENSMUST00000147225ENSMUSG00000022518ENSMUST00000100211ENSMUST00000171105ENSMUST00000175762ENSMUST00000175836ENSMUST00000176394ENSMUST00000176982ENSMUST00000177042ENSMUST00000180566ENSMUST00000180939ENSMUSG00000086464ENSMUST00000127697
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089486 ENST00000399599 N/A N/A N/A N/A 1.292±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562334 N/A N/A N/A 10.020±0.00 N/A 0.879±0.00 0.608±0.00 N/A 1.125±0.00 0.332±0.00 N/A N/A 2.846±0.00 3.558±0.00
ENST00000562579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563332 N/A N/A N/A 4.345±0.00 0.609±0.00 N/A N/A N/A N/A N/A N/A 6.052±1.41 3.567±1.87 N/A
ENST00000563507 N/A N/A N/A N/A N/A 1.259±0.00 N/A N/A N/A N/A 1.555±0.00 N/A N/A N/A
ENST00000564828 3.468±0.00 5.823±0.00 N/A 35.186±0.00 3.915±3.32 4.575±0.00 8.497±0.00 6.253±5.81 4.210±0.00 1.812±1.50 N/A N/A N/A 6.072±3.40
ENST00000566234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567695 7.381±0.00 7.008±0.00 N/A 13.911±10.44 4.568±0.00 6.681±0.00 7.522±7.15 6.232±5.63 4.464±0.00 N/A 1.751±0.00 15.904±4.11 8.344±1.40 8.116±0.00
ENST00000586728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588381 N/A N/A N/A N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000589159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.749±0.00 N/A N/A
ENST00000589890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205832 ENST00000444310 0.023±0.00 0.111±0.00 0.060±0.00 0.216±0.13 0.014±0.00 N/A 0.017±0.00 0.122±0.08 0.027±0.01 0.051±0.00 0.189±0.10 0.051±0.02 0.058±0.03 10.331±4.78
ENSG00000261612 ENST00000564581 0.039±0.00 0.125±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00
ENSG00000261789 ENST00000563704 0.369±0.00 1.091±0.00 N/A 0.418±0.00 N/A N/A 0.082±0.00 0.422±0.00 0.083±0.00 0.280±0.00 0.077±0.00 0.037±0.00 0.033±0.00 0.310±0.24
ENSG00000278434 ENST00000612995 0.047±0.00 0.354±0.00 0.297±0.00 0.159±0.02 0.233±0.05 0.038±0.00 0.053±0.03 0.119±0.03 0.223±0.19 N/A N/A 0.200±0.17 0.029±0.00 0.488±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004070 ENSMUST00000004172 N/A N/A 11.827±0.19 16.645±0.00 N/A N/A N/A N/A 12.737±1.92 N/A N/A 12.547±0.00 20.599±9.01 N/A
ENSMUST00000118885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120232 N/A N/A N/A 73.631±0.00 N/A N/A N/A N/A N/A N/A N/A 51.937±0.00 79.183±54.59 296.902±218.43
ENSMUST00000121529 N/A N/A 21.100±0.00 N/A N/A N/A N/A N/A 11.563±1.00 N/A N/A N/A 28.921±9.49 N/A
ENSMUST00000140367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000004071 ENSMUST00000004173 15.257±1.08 39.409±7.18 8.472±0.70 8.788±2.22 14.958±3.30 9.596±1.38 10.734±1.45 23.219±1.31 11.509±5.91 14.664±1.34 6.174±0.35 16.935±6.03 9.767±3.63 39.768±1.77
ENSMUST00000117713 10.713±2.16 33.887±9.56 7.317±0.00 19.920±8.33 18.196±9.13 N/A 12.893±1.96 20.454±5.99 12.355±2.10 8.651±1.92 18.758±1.76 15.647±4.36 22.251±0.00 N/A
ENSMUST00000118703 14.151±5.60 25.119±6.91 6.297±0.00 14.228±8.03 15.137±4.42 8.102±1.80 11.328±2.67 14.546±4.00 11.828±6.19 7.784±0.03 16.894±1.08 20.061±7.09 15.353±7.99 N/A
ENSMUST00000140187 6.785±0.15 14.518±1.94 5.759±0.34 6.622±0.75 6.195±0.40 4.745±0.50 N/A N/A 5.205±0.31 5.091±0.44 N/A 9.771±2.11 N/A N/A
ENSMUST00000147225 N/A 59.628±11.71 N/A N/A N/A 14.667±0.95 N/A N/A N/A N/A N/A 30.209±2.97 N/A N/A
ENSMUST00000152667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022518 ENSMUST00000100211 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.093±0.25 N/A N/A 0.030±0.00 14.905±1.00
ENSMUST00000171105 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 1.733±0.00 N/A 1.045±0.67 N/A N/A
ENSMUST00000175762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A
ENSMUST00000175836 N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000176394 N/A 0.158±0.11 N/A 0.134±0.00 0.438±0.18 0.383±0.00 0.121±0.07 0.085±0.03 0.067±0.06 N/A 0.046±0.00 2.161±0.00 0.274±0.16 N/A
ENSMUST00000176982 N/A N/A N/A N/A N/A N/A 0.124±0.00 0.022±0.00 N/A N/A N/A 0.592±0.48 N/A 7.972±1.19
ENSMUST00000177042 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 132.118±0.00
ENSMUST00000180939 2.035±1.36 1.725±0.45 N/A 0.179±0.00 1.726±0.51 1.654±0.03 0.583±0.19 0.801±0.49 0.190±0.18 N/A 0.077±0.03 3.453±0.57 0.293±0.16 N/A
ENSMUSG00000086464 ENSMUST00000127697 0.510±0.15 0.574±0.24 0.171±0.00 0.623±0.46 0.478±0.20 0.548±0.17 N/A 0.402±0.07 0.281±0.15 0.312±0.10 0.156±0.04 1.147±0.51 0.420±0.26 0.615±0.06

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