C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930562C15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176394 4930562C15Rik-006 ENSMUSG00000022518 10090 + 16:4858254-4867621 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000176394
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000176394 0.158±0.11 0.134±0.00 0.438±0.18 0.383±0.00 0.121±0.07 0.085±0.03 0.067±0.06 0.046±0.00 2.161±0.00 0.274±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000108 CIL_000108_0002 CGP 16:4750348-4867691
CIL_00010C CIL_00010C_0002 CGP 16:4835416-4880315

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000444310 C16orf96-001 protein_coding Homo_sapiens 0 267

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