C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DiGeorge syndrome critical region gene 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022718 Dgcr8 10090 - 16:18253948-18289249 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009321 Dgcr8-001 18253948-18289246 protein_coding
  ENSMUST00000115633 Dgcr8-002 18253957-18289249 protein_coding
  ENSMUST00000128856 Dgcr8-003 18271246-18284563 retained_intron
  ENSMUST00000134431 Dgcr8-006 18287583-18289170 processed_transcript
  ENSMUST00000144536 Dgcr8-007 18255442-18257130 processed_transcript
  ENSMUST00000152033 Dgcr8-005 18254941-18265269 processed_transcript
  ENSMUST00000156274 Dgcr8-004 18271429-18280246 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009321ENSMUST00000115633ENSMUST00000128856
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009321 7.072±2.19 8.121±0.08 15.510±3.24 4.072±0.86 6.256±0.58 2.234±0.50 4.303±0.06 8.134±5.56 7.013±0.44 2.459±0.39 10.705±2.74 21.543±11.81 5.749±1.76
ENSMUST00000115633 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.192±0.22 N/A N/A N/A
ENSMUST00000128856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.939±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003725 IEA double-stranded RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0015630 IEA microtubule cytoskeleton
GO:0031053 IEA primary miRNA processing
GO:0046872 IEA metal ion binding
GO:0072091 IMP regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035564 dgcr8 DiGeorge syndrome critical region gene 8 protein_coding Danio_rerio
ENSG00000128191 DGCR8 DGCR8 microprocessor complex subunit protein_coding Homo_sapiens

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