C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115633 Dgcr8-002 ENSMUSG00000022718 10090 - 16:18253957-18289249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000115633
Transcript ID Muscle
ENSMUST00000115633 1.192±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 IEA double-stranded RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0015630 IEA microtubule cytoskeleton
GO:0031053 IEA primary miRNA processing
GO:0046872 IEA metal ion binding
GO:0072091 IMP regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051554 dgcr8-201 protein_coding Danio_rerio 1e-22 113
ENSDART00000124915 dgcr8-202 protein_coding Danio_rerio 1e-22 113
ENSDART00000144560 dgcr8-001 protein_coding Danio_rerio 1e-22 113
ENST00000351989 DGCR8-001 protein_coding Homo_sapiens 0 3439
ENST00000383024 DGCR8-201 protein_coding Homo_sapiens 0 2466
ENST00000407755 DGCR8-003 protein_coding Homo_sapiens 0 2266
ENST00000457069 DGCR8-009 protein_coding Homo_sapiens 0 931
ENST00000485802 DGCR8-006 retained_intron Homo_sapiens 0 455
ENST00000491892 DGCR8-007 retained_intron Homo_sapiens 0 427
ENST00000495351 DGCR8-005 retained_intron Homo_sapiens 0 442
ENST00000495826 DGCR8-002 retained_intron Homo_sapiens 0 1908
ENST00000498171 DGCR8-004 retained_intron Homo_sapiens 0 1620

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