C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009321 Dgcr8-001 ENSMUSG00000022718 10090 - 16:18253948-18289246 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009321
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009321 7.072±2.19 8.121±0.08 15.510±3.24 4.072±0.86 6.256±0.58 2.234±0.50 4.303±0.06 8.134±5.56 7.013±0.44 2.459±0.39 10.705±2.74 21.543±11.81 5.749±1.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding
GO:0072091 IMP regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051554 dgcr8-201 protein_coding Danio_rerio 1e-22 113
ENSDART00000124915 dgcr8-202 protein_coding Danio_rerio 1e-22 113
ENSDART00000144560 dgcr8-001 protein_coding Danio_rerio 1e-22 113
ENST00000351989 DGCR8-001 protein_coding Homo_sapiens 0 3502
ENST00000383024 DGCR8-201 protein_coding Homo_sapiens 0 2529
ENST00000407755 DGCR8-003 protein_coding Homo_sapiens 0 2266
ENST00000457069 DGCR8-009 protein_coding Homo_sapiens 0 931
ENST00000485802 DGCR8-006 retained_intron Homo_sapiens 0 455
ENST00000491892 DGCR8-007 retained_intron Homo_sapiens 0 427
ENST00000495351 DGCR8-005 retained_intron Homo_sapiens 0 442
ENST00000495826 DGCR8-002 retained_intron Homo_sapiens 0 1908
ENST00000498171 DGCR8-004 retained_intron Homo_sapiens 0 1620

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