C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forty-two-three domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022800 Fyttd1 10090 + 16:32877500-32908963 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023489 Fyttd1-001 32877781-32908875 protein_coding
  ENSMUST00000120345 Fyttd1-007 32882982-32905630 protein_coding
  ENSMUST00000125843 Fyttd1-006 32895091-32905779 processed_transcript
  ENSMUST00000127493 Fyttd1-008 32902099-32905604 retained_intron
  ENSMUST00000135854 Fyttd1-009 32898750-32905702 retained_intron
  ENSMUST00000137863 Fyttd1-005 32900224-32905638 retained_intron
  ENSMUST00000141590 Fyttd1-003 32877851-32898851 retained_intron
  ENSMUST00000143151 Fyttd1-010 32877500-32891409 processed_transcript
  ENSMUST00000145146 Fyttd1-002 32877813-32897250 processed_transcript
  ENSMUST00000149183 Fyttd1-004 32877813-32895256 retained_intron
  ENSMUST00000171325 Fyttd1-201 32877784-32908963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000023489ENSMUST00000135854ENSMUST00000149183
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000023489 7.926±1.95 14.864±1.03 13.385±6.66 8.033±0.00 8.356±2.03 5.803±0.71 5.861±1.54 15.708±0.98 10.744±4.52 15.350±5.16 21.921±6.75
ENSMUST00000135854 N/A N/A 52.588±0.00 N/A N/A N/A N/A N/A 49.928±0.00 83.005±2.81 102.479±0.00
ENSMUST00000149183 N/A N/A N/A N/A N/A N/A N/A N/A 40.635±0.00 66.256±2.39 98.666±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0002 CGP 16:32821703-32908963
CIL_0006C7 CIL_0006C7_0002 CGP 16:32877500-33015647

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 ISS mRNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0006406 ISS mRNA export from nucleus
GO:0016607 ISS nuclear speck
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000122068 FYTTD1 forty-two-three domain containing 1 protein_coding Homo_sapiens

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