C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forty-two-three domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122068 FYTTD1 9606 + 3:197737179-197787596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241502 FYTTD1-001 197749750-197787596 protein_coding
  ENST00000412924 FYTTD1-004 197749878-197777001 nonsense_mediated_decay
  ENST00000415708 FYTTD1-003 197749553-197782134 protein_coding
  ENST00000418169 FYTTD1-009 197749938-197776942 nonsense_mediated_decay
  ENST00000424384 FYTTD1-006 197750390-197782380 protein_coding
  ENST00000426031 FYTTD1-005 197750167-197770161 protein_coding
  ENST00000428738 FYTTD1-007 197737179-197777001 protein_coding
  ENST00000492360 FYTTD1-010 197778380-197782262 processed_transcript
  ENST00000494309 FYTTD1-002 197749533-197773436 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000241502ENST00000412924ENST00000418169ENST00000424384ENST00000428738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000241502 9.513±0.00 7.620±0.00 1.423±0.00 3.008±0.00 5.680±2.43 1.965±0.00 2.550±0.00 1.705±0.00 6.543±0.00 3.841±0.00 2.565±0.48 4.410±3.15 6.911±0.00 14.834±1.20
ENST00000412924 N/A N/A N/A N/A N/A N/A 4.054±0.00 N/A N/A N/A N/A 2.642±0.00 N/A N/A
ENST00000418169 N/A N/A N/A N/A N/A N/A N/A 6.919±0.00 N/A N/A 14.738±0.00 N/A N/A N/A
ENST00000424384 N/A N/A N/A N/A 5.980±1.50 N/A N/A 2.120±0.00 N/A N/A N/A N/A N/A N/A
ENST00000428738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.347±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0001 CGP 3:197671393-197787596
CIL_0006C7 CIL_0006C7_0001 CGP 3:197737179-197888436

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006406 IMP mRNA export from nucleus
GO:0016607 IDA nuclear speck
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022800 Fyttd1 forty-two-three domain containing 1 protein_coding Mus_musculus

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