C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondrolectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023568 Chodl-001 ENSMUSG00000022860 10090 + 16:78930948-78951733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023568
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023568 1.192±0.83 8.770±0.34 0.871±0.40 0.166±0.08 0.458±0.22 0.039±0.00 0.016±0.00 0.031±0.02 0.174±0.00 0.946±0.22 0.211±0.00 0.034±0.01 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0002 CGP 16:78544012-78951733
CIL_0000RA CIL_0000RA_0002 CGP 16:78930948-79091097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299295 CHODL-001 protein_coding Homo_sapiens 0 1243
ENST00000338326 CHODL-201 protein_coding Homo_sapiens 0 678
ENST00000400127 CHODL-005 protein_coding Homo_sapiens 0 1195
ENST00000400128 CHODL-002 protein_coding Homo_sapiens 0 1197
ENST00000400131 CHODL-003 protein_coding Homo_sapiens 0 680
ENST00000400135 CHODL-004 protein_coding Homo_sapiens 0 678
ENST00000543733 CHODL-009 protein_coding Homo_sapiens 0 1170

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