C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondrolectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114216 Chodl-003 ENSMUSG00000022860 10090 + 16:78930948-78947155 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000114216
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000114216 1.711±1.16 0.143±0.04 0.270±0.01 1.628±0.48 0.057±0.04 0.069±0.04 0.048±0.01 0.666±0.30 0.049±0.02 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0002 CGP 16:78544012-78951733
CIL_0000RA CIL_0000RA_0002 CGP 16:78930948-79091097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299295 CHODL-001 protein_coding Homo_sapiens 0 869
ENST00000338326 CHODL-201 protein_coding Homo_sapiens 0 678
ENST00000400127 CHODL-005 protein_coding Homo_sapiens 0 821
ENST00000400128 CHODL-002 protein_coding Homo_sapiens 0 822
ENST00000400131 CHODL-003 protein_coding Homo_sapiens 0 680
ENST00000400135 CHODL-004 protein_coding Homo_sapiens 0 678
ENST00000543733 CHODL-009 protein_coding Homo_sapiens 0 821

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