C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116584 Mrpl39-001 ENSMUSG00000022889 10090 - 16:84717576-84735742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116584 4.632±1.40 2.278±0.19 7.877±0.85 8.510±1.08 2.125±0.94 1.277±0.83 7.051±0.84 8.019±2.16 9.433±4.64 3.535±1.56 6.040±1.71 3.697±5.73 10.034±3.14 17.965±10.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0002 CGP 16:84717576-84825928

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000002 TAS mitochondrial genome maintenance
GO:0000166 IEA nucleotide binding
GO:0003735 ISA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005762 ISA mitochondrial large ribosomal subunit
GO:0006412 ISA translation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000352957 MRPL39-001 protein_coding Homo_sapiens 0 1027

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