C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022890 Atp5j 10090 - 16:84827866-84835625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023608 Atp5j-001 84827871-84835625 protein_coding
  ENSMUST00000114191 Atp5j-002 84827871-84835503 protein_coding
  ENSMUST00000114193 Atp5j-009 84827866-84834239 protein_coding
  ENSMUST00000127651 Atp5j-004 84831071-84835298 retained_intron
  ENSMUST00000138279 Atp5j-011 84828439-84835602 protein_coding
  ENSMUST00000140036 Atp5j-005 84831329-84835155 processed_transcript
  ENSMUST00000144799 Atp5j-007 84827871-84828813 retained_intron
  ENSMUST00000146103 Atp5j-012 84827874-84831607 retained_intron
  ENSMUST00000146225 Atp5j-006 84829548-84833876 processed_transcript
  ENSMUST00000148787 Atp5j-003 84834276-84835529 retained_intron
  ENSMUST00000150502 Atp5j-010 84833523-84834832 retained_intron
  ENSMUST00000155956 Atp5j-008 84831369-84835005 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023608ENSMUST00000114191ENSMUST00000138279ENSMUST00000146103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023608 94.711±3.89 125.813±37.36 108.489±15.69 132.794±43.25 98.476±21.75 62.192±6.73 415.452±36.65 194.030±38.71 123.826±40.49 71.139±10.40 401.291±73.84 115.063±40.41 116.352±40.24 137.936±10.70
ENSMUST00000114191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 68.906±0.00 N/A 46.870±2.56
ENSMUST00000138279 N/A N/A N/A 211.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 221.791±87.54 N/A
ENSMUST00000146103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 232.198±12.66 134.716±20.44 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ML CIL_0000ML_0003 CGP 16:84774123-84835625
CIL_0000RF CIL_0000RF_0002 CGP 16:84827866-84863779

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000276 IEA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0006200 IEA ATP catabolic process
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016887 IEA ATPase activity
GO:0021762 IEA substantia nigra development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014313 atp5j ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000077967 ATP5J (2 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000089853 ATP5J (3 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000091397 ATP5J (4 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSG00000154723 ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Homo_sapiens

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