C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000ML_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000058996-ENSDARG00000014313 | CGP | 7955 | 1:469281-489335  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000014313  (atp5j)ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 |
ENSDART00000004062 (atp5j-001)
|
485024-489280 | protein_coding | |
|
ENSDART00000134456 (atp5j-002)
|
484779-489335 | protein_coding | ||
|
ENSDART00000146351 (atp5j-004)
|
485390-489289 | protein_coding | ||
|
ENSDART00000147937 (atp5j-003)
|
485386-489289 | protein_coding | ||
|
ENSDARG00000058996 (jam2a) junctional adhesion molecule 2a |
ENSDART00000081989 (jam2a-201)
|
469433-482752 | protein_coding | |
|
ENSDART00000133165 (jam2a-002)
|
478824-482944 | protein_coding | ||
|
ENSDART00000135944 (jam2a-001)
|
469281-478094 | protein_coding | ||
| CIL_0000ML_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000154721-ENSG00000154723 | CGP | 9606 | 21:25639272-25735673 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000154721 (JAM2) junctional adhesion molecule 2 |
ENST00000312957 (JAM2-201)
|
25639282-25717552 | protein_coding | |
|
ENST00000400532 (JAM2-003)
|
25639272-25714573 | protein_coding | ||
|
ENST00000460679 (JAM2-007)
|
25689866-25714731 | nonsense_mediated_decay | ||
|
ENST00000471689 (JAM2-009)
|
25712019-25714889 | retained_intron | ||
|
ENST00000477351 (JAM2-008)
|
25711388-25714739 | processed_transcript | ||
|
ENST00000480456 (JAM2-001)
|
25639272-25717562 | protein_coding | ||
|
ENST00000492962 (JAM2-006)
|
25702178-25710179 | retained_intron | ||
|
ENSG00000154723 (ATP5J) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 |
ENST00000284971 (ATP5J-001)
|
25724480-25734972 | protein_coding | |
|
ENST00000400087 (ATP5J-006)
|
25724480-25735646 | protein_coding | ||
|
ENST00000400090 (ATP5J-005)
|
25724480-25735639 | protein_coding | ||
|
ENST00000400093 (ATP5J-002)
|
25724480-25735673 | protein_coding | ||
|
ENST00000400094 (ATP5J-007)
|
25724480-25734904 | protein_coding | ||
|
ENST00000400099 (ATP5J-004)
|
25716503-25735027 | protein_coding | ||
|
ENST00000457143 (ATP5J-003)
|
25724480-25735033 | protein_coding | ||
|
ENST00000486002 (ATP5J-008)
|
25724698-25734904 | retained_intron | ||
|
ENSG00000154727 (GABPA) GA binding protein transcription factor, alpha subunit 60kDa |
ENST00000354828 (GABPA-002)
|
25734570-25772460 | protein_coding | |
|
ENST00000400075 (GABPA-001)
|
25735384-25772460 | protein_coding | ||
|
ENST00000487266 (GABPA-003)
|
25735389-25752348 | processed_transcript | ||
|
ENSG00000227054 (FDX1P2) ferredoxin 1 pseudogene 2 |
ENST00000450769 (FDX1P2-001)
|
25692180-25692554 | processed_pseudogene | |
|
ENSG00000237731 (RNGTTP1) RNA guanylyltransferase and 5'-phosphatase pseudogene 1 |
ENST00000420965 (RNGTTP1-001)
|
25643489-25644216 | processed_pseudogene | |
|
ENSG00000277686 (AP000225.1) |
ENST00000620129 (AP000225.1-201)
|
25681662-25681758 | miRNA | |
| CIL_0000ML_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000053062-ENSMUSG00000022890 | CGP | 10090 | 16:84774123-84835625 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000008976 (Gabpa) GA repeat binding protein, alpha |
ENSMUST00000009120 (Gabpa-001)
|
84835124-84863779 | protein_coding | |
|
ENSMUST00000114184 (Gabpa-002)
|
84834925-84861315 | protein_coding | ||
|
ENSMUST00000126031 (Gabpa-004)
|
84852583-84860429 | processed_transcript | ||
|
ENSMUST00000139101 (Gabpa-005)
|
84860045-84862465 | processed_transcript | ||
|
ENSMUST00000148035 (Gabpa-003)
|
84856040-84857578 | retained_intron | ||
|
ENSMUSG00000022890 (Atp5j) ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F |
ENSMUST00000023608 (Atp5j-001)
|
84827871-84835625 | protein_coding | |
|
ENSMUST00000114191 (Atp5j-002)
|
84827871-84835503 | protein_coding | ||
|
ENSMUST00000114193 (Atp5j-009)
|
84827866-84834239 | protein_coding | ||
|
ENSMUST00000127651 (Atp5j-004)
|
84831071-84835298 | retained_intron | ||
|
ENSMUST00000138279 (Atp5j-011)
|
84828439-84835602 | protein_coding | ||
|
ENSMUST00000140036 (Atp5j-005)
|
84831329-84835155 | processed_transcript | ||
|
ENSMUST00000144799 (Atp5j-007)
|
84827871-84828813 | retained_intron | ||
|
ENSMUST00000146103 (Atp5j-012)
|
84827874-84831607 | retained_intron | ||
|
ENSMUST00000146225 (Atp5j-006)
|
84829548-84833876 | processed_transcript | ||
|
ENSMUST00000148787 (Atp5j-003)
|
84834276-84835529 | retained_intron | ||
|
ENSMUST00000150502 (Atp5j-010)
|
84833523-84834832 | retained_intron | ||
|
ENSMUST00000155956 (Atp5j-008)
|
84831369-84835005 | processed_transcript | ||
Expression Patterns
|
