C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154723 ATP5J 9606 - 21:25716503-25735673 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284971 ATP5J-001 25724480-25734972 protein_coding
  ENST00000400087 ATP5J-006 25724480-25735646 protein_coding
  ENST00000400090 ATP5J-005 25724480-25735639 protein_coding
  ENST00000400093 ATP5J-002 25724480-25735673 protein_coding
  ENST00000400094 ATP5J-007 25724480-25734904 protein_coding
  ENST00000400099 ATP5J-004 25716503-25735027 protein_coding
  ENST00000457143 ATP5J-003 25724480-25735033 protein_coding
  ENST00000486002 ATP5J-008 25724698-25734904 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284971ENST00000400090ENST00000457143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284971 82.671±0.00 80.218±0.00 14.034±0.00 72.619±45.80 75.849±59.41 106.260±89.76 240.446±194.60 101.945±80.14 77.608±50.28 43.097±25.87 74.074±10.54 81.215±40.94 112.463±10.51 117.028±0.00
ENST00000400090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.594±0.00 N/A N/A
ENST00000457143 N/A N/A N/A 23.858±0.00 N/A N/A N/A 40.733±0.00 N/A N/A 23.838±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0001 CGP 21:25585656-25717562
CIL_0000ML CIL_0000ML_0002 CGP 21:25639272-25735673
CIL_0000RF CIL_0000RF_0001 CGP 21:25716503-25772460

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000276 IEA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005215 NAS transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005753 IDA mitochondrial proton-transporting ATP synthase complex
GO:0006200 IDA ATP catabolic process
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016887 IDA ATPase activity
GO:0021762 IEP substantia nigra development
GO:0022857 IC transmembrane transporter activity
GO:0022904 TAS respiratory electron transport chain
GO:0042776 IC mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014313 atp5j ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000077967 ATP5J (2 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000089853 ATP5J (3 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSDARG00000091397 ATP5J (4 of 4) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 protein_coding Danio_rerio
ENSMUSG00000022890 Atp5j ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein_coding Mus_musculus

Loading