C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000RF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000154723-ENSG00000154727 | CGP | 9606 | 21:25716503-25772460  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000154721  (JAM2)junctional adhesion molecule 2 |
ENST00000312957 (JAM2-201)
|
25639282-25717552 | protein_coding | |
|
ENST00000400532 (JAM2-003)
|
25639272-25714573 | protein_coding | ||
|
ENST00000460679 (JAM2-007)
|
25689866-25714731 | nonsense_mediated_decay | ||
|
ENST00000471689 (JAM2-009)
|
25712019-25714889 | retained_intron | ||
|
ENST00000477351 (JAM2-008)
|
25711388-25714739 | processed_transcript | ||
|
ENST00000480456 (JAM2-001)
|
25639272-25717562 | protein_coding | ||
|
ENST00000492962 (JAM2-006)
|
25702178-25710179 | retained_intron | ||
|
ENSG00000154723 (ATP5J) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 |
ENST00000284971 (ATP5J-001)
|
25724480-25734972 | protein_coding | |
|
ENST00000400087 (ATP5J-006)
|
25724480-25735646 | protein_coding | ||
|
ENST00000400090 (ATP5J-005)
|
25724480-25735639 | protein_coding | ||
|
ENST00000400093 (ATP5J-002)
|
25724480-25735673 | protein_coding | ||
|
ENST00000400094 (ATP5J-007)
|
25724480-25734904 | protein_coding | ||
|
ENST00000400099 (ATP5J-004)
|
25716503-25735027 | protein_coding | ||
|
ENST00000457143 (ATP5J-003)
|
25724480-25735033 | protein_coding | ||
|
ENST00000486002 (ATP5J-008)
|
25724698-25734904 | retained_intron | ||
|
ENSG00000154727 (GABPA) GA binding protein transcription factor, alpha subunit 60kDa |
ENST00000354828 (GABPA-002)
|
25734570-25772460 | protein_coding | |
|
ENST00000400075 (GABPA-001)
|
25735384-25772460 | protein_coding | ||
|
ENST00000487266 (GABPA-003)
|
25735389-25752348 | processed_transcript | ||
|
ENSG00000235514 (LLPHP2) LLP homolog, long-term synaptic facilitation (Aplysia) pseudogene 2 |
ENST00000436405 (LLPHP2-001)
|
25762938-25763333 | processed_pseudogene | |
| CIL_0000RF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000022890-ENSMUSG00000008976 | CGP | 10090 | 16:84827866-84863779 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000008976 (Gabpa) GA repeat binding protein, alpha |
ENSMUST00000009120 (Gabpa-001)
|
84835124-84863779 | protein_coding | |
|
ENSMUST00000114184 (Gabpa-002)
|
84834925-84861315 | protein_coding | ||
|
ENSMUST00000126031 (Gabpa-004)
|
84852583-84860429 | processed_transcript | ||
|
ENSMUST00000139101 (Gabpa-005)
|
84860045-84862465 | processed_transcript | ||
|
ENSMUST00000148035 (Gabpa-003)
|
84856040-84857578 | retained_intron | ||
|
ENSMUSG00000022890 (Atp5j) ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F |
ENSMUST00000023608 (Atp5j-001)
|
84827871-84835625 | protein_coding | |
|
ENSMUST00000114191 (Atp5j-002)
|
84827871-84835503 | protein_coding | ||
|
ENSMUST00000114193 (Atp5j-009)
|
84827866-84834239 | protein_coding | ||
|
ENSMUST00000127651 (Atp5j-004)
|
84831071-84835298 | retained_intron | ||
|
ENSMUST00000138279 (Atp5j-011)
|
84828439-84835602 | protein_coding | ||
|
ENSMUST00000140036 (Atp5j-005)
|
84831329-84835155 | processed_transcript | ||
|
ENSMUST00000144799 (Atp5j-007)
|
84827871-84828813 | retained_intron | ||
|
ENSMUST00000146103 (Atp5j-012)
|
84827874-84831607 | retained_intron | ||
|
ENSMUST00000146225 (Atp5j-006)
|
84829548-84833876 | processed_transcript | ||
|
ENSMUST00000148787 (Atp5j-003)
|
84834276-84835529 | retained_intron | ||
|
ENSMUST00000150502 (Atp5j-010)
|
84833523-84834832 | retained_intron | ||
|
ENSMUST00000155956 (Atp5j-008)
|
84831369-84835005 | processed_transcript | ||
Expression Patterns
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