C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of calcineurin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022951 Rcan1 10090 - 16:92391953-92466146 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023672 Rcan1-201 92391953-92400077 protein_coding
  ENSMUST00000060005 Rcan1-202 92391953-92466146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023672ENSMUST00000060005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023672 2.242±0.76 N/A 4.875±0.59 5.092±0.00 4.589±3.07 N/A 10.485±0.45 15.455±1.67 2.191±0.89 4.436±1.46 21.572±8.94 4.297±2.55 11.815±5.74 3.676±0.57
ENSMUST00000060005 6.513±1.72 3.986±0.51 6.729±0.61 16.323±4.95 6.079±1.09 8.054±0.64 8.932±0.49 4.323±0.60 3.123±1.19 6.327±1.01 12.715±1.87 4.602±2.05 8.082±2.14 2.149±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_0008ZS CIL_0008ZS_0002 VISTA 16:92110151-92716672
CIL_00094R CIL_00094R_0002 VISTA 16:92127453-92730131
CIL_00078G CIL_00078G_0002 CGP 16:92346001-92466146

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002931 IMP response to ischemia
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006979 IGI response to oxidative stress
GO:0007519 IEA skeletal muscle tissue development
GO:0007614 IGI short-term memory
GO:0009612 IEA response to mechanical stimulus
GO:0031987 IGI locomotion involved in locomotory behavior
GO:0033173 IGI calcineurin-NFAT signaling cascade
GO:0043627 IEA response to estrogen
GO:0043666 IDA regulation of phosphoprotein phosphatase activity
GO:0048741 IDA skeletal muscle fiber development
GO:0051151 IEA negative regulation of smooth muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003109 rcan1a regulator of calcineurin 1a protein_coding Danio_rerio
ENSDARG00000041157 rcan1b regulator of calcineurin 1b protein_coding Danio_rerio
ENSG00000159200 RCAN1 regulator of calcineurin 1 protein_coding Homo_sapiens

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