C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor II I repeat domain-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023079 Gtf2ird1 10090 - 5:134357669-134456716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073161 Gtf2ird1-201 134357669-134456716 protein_coding
  ENSMUST00000074114 Gtf2ird1-202 134357669-134456716 protein_coding
  ENSMUST00000100650 Gtf2ird1-203 134357669-134456716 protein_coding
  ENSMUST00000100652 Gtf2ird1-204 134357669-134456716 protein_coding
  ENSMUST00000100654 Gtf2ird1-205 134357669-134456716 protein_coding
  ENSMUST00000111244 Gtf2ird1-206 134357669-134456262 protein_coding
  ENSMUST00000111245 Gtf2ird1-207 134357669-134456716 protein_coding
  ENSMUST00000167084 Gtf2ird1-208 134357669-134456716 protein_coding
  ENSMUST00000171794 Gtf2ird1-209 134357669-134456716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073161ENSMUST00000074114ENSMUST00000100650ENSMUST00000100652ENSMUST00000100654ENSMUST00000111244ENSMUST00000111245ENSMUST00000167084ENSMUST00000171794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073161 1.285±0.00 N/A N/A N/A N/A N/A 0.582±0.00 N/A 0.616±0.09 N/A 0.467±0.11 N/A N/A 2.196±0.33
ENSMUST00000074114 N/A 1.502±0.27 N/A 3.108±2.33 1.833±0.32 N/A N/A N/A 1.358±0.00 N/A 0.366±0.06 1.716±0.00 0.663±0.00 N/A
ENSMUST00000100650 2.023±0.80 N/A 2.421±0.25 5.053±2.91 1.763±0.77 4.099±0.10 0.907±0.25 1.220±0.40 0.968±0.22 1.956±0.41 0.627±0.26 2.246±0.46 1.240±0.43 0.622±0.00
ENSMUST00000100652 1.020±0.06 N/A 1.871±0.03 1.666±0.42 0.713±0.09 2.448±0.71 0.471±0.07 1.300±0.32 0.835±0.19 0.865±0.00 0.506±0.22 1.445±0.61 0.671±0.17 0.742±0.07
ENSMUST00000100654 3.165±0.96 4.042±1.84 N/A N/A 1.016±0.16 2.977±0.00 0.606±0.00 0.651±0.08 N/A 2.006±0.41 N/A 2.598±0.62 0.449±0.00 N/A
ENSMUST00000111244 1.470±0.14 2.060±0.00 1.588±0.00 3.777±1.46 1.341±0.36 8.440±3.26 0.890±0.11 1.652±0.55 1.489±0.40 1.252±0.00 0.433±0.00 3.492±1.78 0.852±0.50 1.325±0.19
ENSMUST00000111245 1.485±0.00 N/A 1.463±0.33 1.278±0.00 N/A N/A 0.572±0.00 0.861±0.13 0.746±0.00 0.776±0.00 0.798±0.22 1.721±0.03 0.640±0.00 0.895±0.00
ENSMUST00000167084 N/A 1.039±0.00 N/A N/A N/A N/A N/A N/A 0.837±0.00 N/A N/A N/A 0.446±0.00 N/A
ENSMUST00000171794 2.135±1.02 N/A N/A 2.361±0.00 0.857±0.00 N/A 0.668±0.25 N/A 0.825±0.03 N/A 0.758±0.16 3.075±1.30 1.092±0.42 1.685±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0014886 IDA transition between slow and fast fiber

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022203 gtf2ird1 GTF2I repeat domain-containing 1 protein_coding Danio_rerio
ENSG00000006704 GTF2IRD1 GTF2I repeat domain containing 1 protein_coding Homo_sapiens

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