C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II I repeat domain-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111245 Gtf2ird1-207 ENSMUSG00000023079 10090 - 5:134357669-134456716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111245
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111245 1.485±0.00 1.463±0.33 1.278±0.00 0.572±0.00 0.861±0.13 0.746±0.00 0.776±0.00 0.798±0.22 1.721±0.03 0.640±0.00 0.895±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0014886 IDA transition between slow and fast fiber

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265755 GTF2IRD1-001 protein_coding Homo_sapiens 0 2008
ENST00000424337 GTF2IRD1-005 protein_coding Homo_sapiens 0 2008
ENST00000434721 GTF2IRD1P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 248
ENST00000437494 AC005077.5-002 processed_transcript Homo_sapiens 2e-19 99
ENST00000448776 GS1-124K5.10-001 unprocessed_pseudogene Homo_sapiens 0 222
ENST00000455841 GTF2IRD1-002 protein_coding Homo_sapiens 0 1677
ENST00000457166 GTF2IRD1P1-002 processed_transcript Homo_sapiens 9e-27 126
ENST00000470715 GTF2IRD1-006 protein_coding Homo_sapiens 0 713
ENST00000476977 GTF2IRD1-003 protein_coding Homo_sapiens 0 1958
ENST00000486086 GTF2IRD1-007 retained_intron Homo_sapiens 0 436
ENST00000489094 GTF2IRD1-004 processed_transcript Homo_sapiens 0 2254

Loading