C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II I repeat domain-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111244 Gtf2ird1-206 ENSMUSG00000023079 10090 - 5:134357669-134456262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111244 1.470±0.14 2.060±0.00 1.588±0.00 3.777±1.46 1.341±0.36 8.440±3.26 0.890±0.11 1.652±0.55 1.489±0.40 1.252±0.00 0.433±0.00 3.492±1.78 0.852±0.50 1.325±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0014886 IDA transition between slow and fast fiber

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265755 GTF2IRD1-001 protein_coding Homo_sapiens 0 1958
ENST00000424337 GTF2IRD1-005 protein_coding Homo_sapiens 0 2726
ENST00000434721 GTF2IRD1P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 248
ENST00000437494 AC005077.5-002 processed_transcript Homo_sapiens 2e-19 99
ENST00000448776 GS1-124K5.10-001 unprocessed_pseudogene Homo_sapiens 0 499
ENST00000455841 GTF2IRD1-002 protein_coding Homo_sapiens 0 2446
ENST00000457166 GTF2IRD1P1-002 processed_transcript Homo_sapiens 9e-27 126
ENST00000470715 GTF2IRD1-006 protein_coding Homo_sapiens 0 806
ENST00000476977 GTF2IRD1-003 protein_coding Homo_sapiens 0 2726
ENST00000486086 GTF2IRD1-007 retained_intron Homo_sapiens 0 436
ENST00000489094 GTF2IRD1-004 processed_transcript Homo_sapiens 0 1956

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