C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synovial sarcoma, X member B, breakpoint 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023165 Ssxb2 10090 - X:8454345-8461726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023931 Ssxb2-001 8454345-8461726 protein_coding
  ENSMUST00000103000 Ssxb2-002 8454345-8461726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000023931ENSMUST00000103000
Transcript ID Brain Placenta Testis
ENSMUST00000023931 N/A N/A 0.279±0.09
ENSMUST00000103000 0.044±0.00 0.256±0.00 2.924±2.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y9 CIL_0000Y9_000I CGP X:8413305-8461726
CIL_0000Y9 CIL_0000Y9_0007 CGP X:8454345-8524954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126752 SSX1 synovial sarcoma, X breakpoint 1 protein_coding Homo_sapiens
ENSG00000165583 SSX5 synovial sarcoma, X breakpoint 5 protein_coding Homo_sapiens
ENSG00000165584 SSX3 synovial sarcoma, X breakpoint 3 protein_coding Homo_sapiens
ENSG00000187754 SSX7 synovial sarcoma, X breakpoint 7 protein_coding Homo_sapiens
ENSG00000241476 SSX2 synovial sarcoma, X breakpoint 2 protein_coding Homo_sapiens
ENSG00000268009 SSX4 synovial sarcoma, X breakpoint 4 protein_coding Homo_sapiens
ENSG00000268447 SSX2B synovial sarcoma, X breakpoint 2B protein_coding Homo_sapiens
ENSG00000269791 SSX4B synovial sarcoma, X breakpoint 4B protein_coding Homo_sapiens

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