C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-associated ring finger (C3HC4) 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023307 March5 10090 + 19:37207543-37222139 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024078 March5-001 37207543-37222139 protein_coding
  ENSMUST00000112391 March5-003 37207568-37221076 protein_coding
  ENSMUST00000128530 March5-004 37217190-37221977 protein_coding
  ENSMUST00000148105 March5-002 37207576-37217641 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024078ENSMUST00000112391ENSMUST00000128530ENSMUST00000148105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024078 28.008±9.19 30.494±14.75 27.048±0.26 29.237±13.07 34.049±9.50 13.210±10.53 18.704±5.00 26.614±3.43 41.084±18.40 20.204±2.84 31.056±1.38 29.916±14.39 20.462±7.30 13.721±5.80
ENSMUST00000112391 N/A N/A N/A N/A 5.247±0.00 N/A N/A 5.414±0.00 5.536±0.05 5.456±0.45 N/A N/A N/A 4.838±0.91
ENSMUST00000128530 9.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.451±0.90 8.163±0.05 N/A
ENSMUST00000148105 N/A 102.704±67.75 N/A N/A 39.758±6.68 18.087±0.00 N/A N/A N/A 11.432±0.00 N/A 19.105±7.49 4.991±0.00 3.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139
CIL_0007VX CIL_0007VX_0002 VISTA 19:37192022-37797349
CIL_00018P CIL_00018P_0002 CGP 19:37207543-37337852

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005741 ISS mitochondrial outer membrane
GO:0005783 ISS endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0051020 IEA GTPase binding
GO:0051865 ISS protein autoubiquitination
GO:0070585 IEA protein localization to mitochondrion
GO:0090140 ISS regulation of mitochondrial fission
GO:0090141 IEA positive regulation of mitochondrial fission
GO:0090344 ISS negative regulation of cell aging

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032552 march5 membrane-associated ring finger (C3HC4) 5 protein_coding Danio_rerio
ENSG00000198060 MARCH5 membrane-associated ring finger (C3HC4) 5 protein_coding Homo_sapiens

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