C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024078 March5-001 ENSMUSG00000023307 10090 + 19:37207543-37222139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024078 28.008±9.19 30.494±14.75 27.048±0.26 29.237±13.07 34.049±9.50 13.210±10.53 18.704±5.00 26.614±3.43 41.084±18.40 20.204±2.84 31.056±1.38 29.916±14.39 20.462±7.30 13.721±5.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139
CIL_0007VX CIL_0007VX_0002 VISTA 19:37192022-37797349
CIL_00018P CIL_00018P_0002 CGP 19:37207543-37337852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005741 ISS mitochondrial outer membrane
GO:0005783 ISS endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0051020 IEA GTPase binding
GO:0051865 ISS protein autoubiquitination
GO:0070585 IEA protein localization to mitochondrion
GO:0090140 ISS regulation of mitochondrial fission
GO:0090141 IEA positive regulation of mitochondrial fission
GO:0090344 ISS negative regulation of cell aging

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358935 MARCH5-001 protein_coding Homo_sapiens 0 1914
ENST00000462465 MARCH5-003 processed_transcript Homo_sapiens 0 313
ENST00000467521 MARCH5-002 processed_transcript Homo_sapiens 0 880
ENST00000492319 MARCH5-004 processed_transcript Homo_sapiens 0 313

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