C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112391 March5-003 ENSMUSG00000023307 10090 + 19:37207568-37221076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungTestisENSMUST00000112391
Transcript ID Breast Kidney Liver Lung Testis
ENSMUST00000112391 5.247±0.00 5.414±0.00 5.536±0.05 5.456±0.45 4.838±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139
CIL_0007VX CIL_0007VX_0002 VISTA 19:37192022-37797349
CIL_00018P CIL_00018P_0002 CGP 19:37207543-37337852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005741 ISS mitochondrial outer membrane
GO:0005783 ISS endoplasmic reticulum
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0051865 ISS protein autoubiquitination
GO:0090140 ISS regulation of mitochondrial fission
GO:0090344 ISS negative regulation of cell aging

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358935 MARCH5-001 protein_coding Homo_sapiens 0 1306
ENST00000462465 MARCH5-003 processed_transcript Homo_sapiens 0 313
ENST00000467521 MARCH5-002 processed_transcript Homo_sapiens 0 880
ENST00000492319 MARCH5-004 processed_transcript Homo_sapiens 0 331

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