C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radial spoke head 9 homolog (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023966 Rsph9 10090 - 17:46122035-46144216 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024762 Rsph9-001 46129271-46144216 protein_coding
  ENSMUST00000148581 Rsph9-003 46122035-46136830 protein_coding
  ENSMUST00000152354 Rsph9-002 46134504-46136795 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024762ENSMUST00000148581ENSMUST00000152354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024762 3.506±2.62 6.117±2.01 6.756±2.19 13.750±0.43 2.814±1.13 3.265±1.36 0.866±0.37 13.968±0.92 0.565±0.24 11.074±4.28 0.279±0.11 12.812±3.86 0.558±0.25 106.694±23.47
ENSMUST00000148581 N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A 0.464±0.00 4.070±0.00 N/A N/A
ENSMUST00000152354 N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.05 N/A N/A 1.157±0.00 0.136±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_00049T CIL_00049T_0002 CGP 17:46016993-46128910
CIL_0006UL CIL_0006UL_0002 CGP 17:46110986-46144216

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003341 IGI cilium movement
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0005930 IC axoneme
GO:0031514 IC motile cilium
GO:0035082 IGI axoneme assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017355 rsph9 radial spoke head 9 homolog protein_coding Danio_rerio
ENSG00000172426 RSPH9 radial spoke head 9 homolog (Chlamydomonas) protein_coding Homo_sapiens

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