C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024465-ENSDARG00000017355 CGP 7955 4:5515945-5525279
GeneTranscriptPositionBiotype
ENSDARG00000017355 (rsph9)
radial spoke head 9 homolog 		ENSDART00000010903 (rsph9-001) 5518500-5525279 protein_coding
ENSDARG00000024465 (mrps18a)
mitochondrial ribosomal protein S18A 		ENSDART00000028941 (mrps18a-001) 5515945-5518415 protein_coding
ENSDART00000150847 (mrps18a-002) 5515963-5518057 retained_intron
CIL_0006UL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023967-ENSMUSG00000023966 CGP 10090 17:46110986-46144216
GeneTranscriptPositionBiotype
ENSMUSG00000023966 (Rsph9)
radial spoke head 9 homolog (Chlamydomonas) 		ENSMUST00000024762 (Rsph9-001) 46129271-46144216 protein_coding
ENSMUST00000148581 (Rsph9-003) 46122035-46136830 protein_coding
ENSMUST00000152354 (Rsph9-002) 46134504-46136795 retained_intron
ENSMUSG00000023967 (Mrps18a)
mitochondrial ribosomal protein S18A 		ENSMUST00000024763 (Mrps18a-001) 46110986-46128910 protein_coding
ENSMUST00000123646 (Mrps18a-004) 46110996-46125865 protein_coding
ENSMUST00000131943 (Mrps18a-003) 46110995-46123127 retained_intron
ENSMUST00000134237 (Mrps18a-005) 46122803-46128870 processed_transcript
ENSMUST00000146255 (Mrps18a-006) 46125458-46128793 retained_intron
ENSMUST00000147672 (Mrps18a-002) 46125275-46127723 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UL_0001ENSDARG00000017355ENSDART00000010903ENSDARG00000024465ENSDART00000028941ENSDART00000150847CIL_0006UL_0002ENSMUSG00000023966ENSMUST00000024762ENSMUST00000148581ENSMUST00000152354ENSMUSG00000023967ENSMUST00000024763ENSMUST00000123646ENSMUST00000131943ENSMUST00000134237ENSMUST00000146255ENSMUST00000147672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UL_0001ENSDARG00000017355ENSDART00000010903ENSDARG00000024465ENSDART00000028941CIL_0006UL_0002ENSMUSG00000023966ENSMUST00000024762ENSMUST00000148581ENSMUST00000152354ENSMUSG00000023967ENSMUST00000024763ENSMUST00000123646ENSMUST00000134237ENSMUST00000146255ENSMUST00000147672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017355 ENSDART00000010903 N/A N/A N/A 0.692±0.30 N/A N/A N/A 0.939±0.81 N/A N/A 0.120±0.00 N/A N/A N/A
ENSDARG00000024465 ENSDART00000028941 N/A N/A N/A 25.597±1.98 N/A N/A 18.756±17.41 11.648±11.53 1.425±0.00 N/A 12.274±0.00 N/A N/A N/A
ENSDART00000150847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023966 ENSMUST00000024762 3.506±2.62 6.117±2.01 6.756±2.19 13.750±0.43 2.814±1.13 3.265±1.36 0.866±0.37 13.968±0.92 0.565±0.24 11.074±4.28 0.279±0.11 12.812±3.86 0.558±0.25 106.694±23.47
ENSMUST00000148581 N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A 0.464±0.00 4.070±0.00 N/A N/A
ENSMUST00000152354 N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.05 N/A N/A 1.157±0.00 0.136±0.03 N/A
ENSMUSG00000023967 ENSMUST00000024763 25.436±1.18 13.982±1.12 35.593±1.57 27.516±3.43 16.950±5.04 19.294±4.18 41.086±6.56 48.743±4.58 26.511±6.71 17.173±1.58 44.327±2.28 19.854±9.61 36.364±14.18 35.175±11.51
ENSMUST00000123646 N/A N/A N/A N/A 5.513±0.00 N/A N/A N/A 6.559±0.00 N/A N/A N/A N/A N/A
ENSMUST00000131943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.170±0.23 N/A N/A
ENSMUST00000146255 N/A N/A N/A 10.549±0.00 7.952±0.00 N/A N/A N/A N/A N/A N/A 13.802±0.00 10.940±4.07 N/A
ENSMUST00000147672 1.830±0.77 1.390±0.19 N/A 1.544±0.16 2.008±0.37 1.420±0.20 N/A N/A N/A 1.908±0.04 N/A 2.158±0.47 N/A N/A

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