C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034700-ENSDARG00000024465 CGP 7955 4:5441937-5518415
GeneTranscriptPositionBiotype
ENSDARG00000024465 (mrps18a)
mitochondrial ribosomal protein S18A 		ENSDART00000028941 (mrps18a-001) 5515945-5518415 protein_coding
ENSDART00000150847 (mrps18a-002) 5515963-5518057 retained_intron
ENSDARG00000034700 (vegfab)
vascular endothelial growth factor Ab 		ENSDART00000017349 (vegfab-201) 5460438-5471073 protein_coding
ENSDART00000103180 (vegfab-202) 5460418-5470523 protein_coding
ENSDART00000109854 (vegfab-003) 5441937-5468486 protein_coding
ENSDART00000132431 (vegfab-002) 5460432-5470416 protein_coding
ENSDART00000136229 (vegfab-001) 5460864-5471051 protein_coding
CIL_00049T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023951-ENSMUSG00000023967 CGP 10090 17:46016993-46128910
GeneTranscriptPositionBiotype
ENSMUSG00000023951 (Vegfa)
vascular endothelial growth factor A 		ENSMUST00000024747 (Vegfa-008) 46016993-46031815 protein_coding
ENSMUST00000071648 (Vegfa-001) 46016993-46032369 protein_coding
ENSMUST00000113519 (Vegfa-009) 46018858-46031356 protein_coding
ENSMUST00000113520 (Vegfa-010) 46018831-46031356 protein_coding
ENSMUST00000133605 (Vegfa-004) 46018606-46024881 retained_intron
ENSMUST00000142321 (Vegfa-005) 46018833-46024802 retained_intron
ENSMUST00000142351 (Vegfa-003) 46018543-46032369 protein_coding
ENSMUST00000143985 (Vegfa-006) 46018712-46021372 retained_intron
ENSMUST00000146149 (Vegfa-002) 46025196-46031356 retained_intron
ENSMUST00000150327 (Vegfa-007) 46018479-46024864 retained_intron
ENSMUST00000167860 (Vegfa-201) 46016996-46032377 protein_coding
ENSMUSG00000023966 (Rsph9)
radial spoke head 9 homolog (Chlamydomonas) 		ENSMUST00000024762 (Rsph9-001) 46129271-46144216 protein_coding
ENSMUST00000148581 (Rsph9-003) 46122035-46136830 protein_coding
ENSMUST00000152354 (Rsph9-002) 46134504-46136795 retained_intron
ENSMUSG00000023967 (Mrps18a)
mitochondrial ribosomal protein S18A 		ENSMUST00000024763 (Mrps18a-001) 46110986-46128910 protein_coding
ENSMUST00000123646 (Mrps18a-004) 46110996-46125865 protein_coding
ENSMUST00000131943 (Mrps18a-003) 46110995-46123127 retained_intron
ENSMUST00000134237 (Mrps18a-005) 46122803-46128870 processed_transcript
ENSMUST00000146255 (Mrps18a-006) 46125458-46128793 retained_intron
ENSMUST00000147672 (Mrps18a-002) 46125275-46127723 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049T_0001ENSDARG00000024465ENSDART00000028941ENSDART00000150847ENSDARG00000034700ENSDART00000017349ENSDART00000103180ENSDART00000109854ENSDART00000132431ENSDART00000136229CIL_00049T_0002ENSMUSG00000023951ENSMUST00000024747ENSMUST00000071648ENSMUST00000113519ENSMUST00000113520ENSMUST00000133605ENSMUST00000142321ENSMUST00000142351ENSMUST00000143985ENSMUST00000146149ENSMUST00000150327ENSMUST00000167860ENSMUSG00000023966ENSMUST00000024762ENSMUST00000148581ENSMUST00000152354ENSMUSG00000023967ENSMUST00000024763ENSMUST00000123646ENSMUST00000131943ENSMUST00000134237ENSMUST00000146255ENSMUST00000147672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049T_0001ENSDARG00000024465ENSDART00000028941ENSDARG00000034700ENSDART00000017349ENSDART00000103180ENSDART00000132431ENSDART00000136229CIL_00049T_0002ENSMUSG00000023951ENSMUST00000024747ENSMUST00000071648ENSMUST00000113519ENSMUST00000113520ENSMUST00000133605ENSMUST00000142351ENSMUST00000150327ENSMUST00000167860ENSMUSG00000023966ENSMUST00000024762ENSMUST00000148581ENSMUST00000152354ENSMUSG00000023967ENSMUST00000024763ENSMUST00000123646ENSMUST00000134237ENSMUST00000146255ENSMUST00000147672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024465 ENSDART00000028941 N/A N/A N/A 25.597±1.98 N/A N/A 18.756±17.41 11.648±11.53 1.425±0.00 N/A 12.274±0.00 N/A N/A N/A
ENSDART00000150847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000034700 ENSDART00000017349 N/A N/A N/A 2.209±0.67 N/A N/A 25.337±0.00 N/A N/A N/A 5.782±0.00 N/A N/A N/A
ENSDART00000103180 N/A N/A N/A 5.262±0.29 N/A N/A 15.871±8.30 4.214±1.46 N/A N/A 5.951±0.00 N/A N/A N/A
ENSDART00000109854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132431 N/A N/A N/A 1.748±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136229 N/A N/A N/A 2.579±0.00 N/A N/A N/A 5.099±0.00 0.472±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023951 ENSMUST00000024747 28.431±3.07 84.070±19.91 11.870±3.77 9.139±1.61 45.529±7.55 14.881±2.73 19.702±0.00 22.241±4.41 9.912±2.27 168.118±19.50 N/A 21.395±5.61 6.653±0.00 1.490±0.54
ENSMUST00000071648 18.042±3.96 59.481±28.46 16.509±4.82 19.225±5.45 15.337±2.48 16.681±2.58 26.629±6.43 17.426±4.37 15.012±7.20 87.723±16.13 24.305±2.04 22.007±7.28 12.379±8.12 0.724±0.14
ENSMUST00000113519 83.830±0.00 N/A N/A N/A 99.603±0.00 N/A N/A N/A N/A N/A N/A N/A 53.862±0.00 2.757±0.00
ENSMUST00000113520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.503±0.41 N/A N/A
ENSMUST00000133605 N/A N/A N/A 25.358±0.00 N/A N/A N/A N/A 13.983±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142351 32.075±5.62 87.960±28.06 N/A N/A 27.943±2.15 9.259±2.13 N/A 22.612±0.53 4.921±0.00 N/A 20.361±2.97 18.761±3.72 15.958±11.84 1.108±0.00
ENSMUST00000143985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.401±0.00 N/A 0.914±0.00
ENSMUST00000167860 N/A N/A N/A 19.865±0.00 N/A N/A N/A N/A N/A N/A N/A 40.770±0.00 23.415±13.04 0.829±0.00
ENSMUSG00000023966 ENSMUST00000024762 3.506±2.62 6.117±2.01 6.756±2.19 13.750±0.43 2.814±1.13 3.265±1.36 0.866±0.37 13.968±0.92 0.565±0.24 11.074±4.28 0.279±0.11 12.812±3.86 0.558±0.25 106.694±23.47
ENSMUST00000148581 N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A 0.464±0.00 4.070±0.00 N/A N/A
ENSMUST00000152354 N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.05 N/A N/A 1.157±0.00 0.136±0.03 N/A
ENSMUSG00000023967 ENSMUST00000024763 25.436±1.18 13.982±1.12 35.593±1.57 27.516±3.43 16.950±5.04 19.294±4.18 41.086±6.56 48.743±4.58 26.511±6.71 17.173±1.58 44.327±2.28 19.854±9.61 36.364±14.18 35.175±11.51
ENSMUST00000123646 N/A N/A N/A N/A 5.513±0.00 N/A N/A N/A 6.559±0.00 N/A N/A N/A N/A N/A
ENSMUST00000131943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.170±0.23 N/A N/A
ENSMUST00000146255 N/A N/A N/A 10.549±0.00 7.952±0.00 N/A N/A N/A N/A N/A N/A 13.802±0.00 10.940±4.07 N/A
ENSMUST00000147672 1.830±0.77 1.390±0.19 N/A 1.544±0.16 2.008±0.37 1.420±0.20 N/A N/A N/A 1.908±0.04 N/A 2.158±0.47 N/A N/A

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