C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 20517
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023984 Gm20517 10090 + 17:47611589-47683861 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000130830 Gm20517-003 47611598-47651613 retained_intron
  ENSMUST00000132397 Gm20517-001 47611613-47683861 nonsense_mediated_decay
  ENSMUST00000146105 Gm20517-002 47611589-47650289 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryTestisENSMUST00000132397
Transcript ID Adrenal Ovary Testis
ENSMUST00000132397 4.063±0.31 4.228±0.08 17.958±2.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_0006L5 CIL_0006L5_0002 CGP 17:47599331-47624418
CIL_0006L6 CIL_0006L6_0002 CGP 17:47611589-47686738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 IEA mediator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046006 med20 mediator complex subunit 20 protein_coding Danio_rerio
ENSG00000124641 MED20 mediator complex subunit 20 protein_coding Homo_sapiens

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