C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006L6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000046006-ENSDARG00000000229 CGP 7955 22:533230-556858
GeneTranscriptPositionBiotype
ENSDARG00000000229 (usp49)
ubiquitin specific peptidase 49 		ENSDART00000037069 (usp49-001) 544734-556858 protein_coding
ENSDARG00000046006 (med20)
mediator complex subunit 20 		ENSDART00000067638 (med20-201) 533230-539399 protein_coding
ENSDART00000138501 (med20-001) 535945-539399 protein_coding
CIL_0006L6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023984-ENSMUSG00000090115 CGP 10090 17:47611589-47686738
GeneTranscriptPositionBiotype
ENSMUSG00000033475 (Tomm6)
translocase of outer mitochondrial membrane 6 homolog (yeast) 		ENSMUST00000113301 (Tomm6-002) 47686740-47688068 protein_coding
ENSMUST00000113302 (Tomm6-001) 47686646-47688183 protein_coding
ENSMUST00000143156 (Tomm6-003) 47686740-47688386 retained_intron
ENSMUSG00000090115 (Usp49)
ubiquitin specific peptidase 49 		ENSMUST00000024779 (Usp49-001) 47630690-47686738 protein_coding
ENSMUST00000131550 (Usp49-004) 47673301-47680728 nonsense_mediated_decay
ENSMUST00000145314 (Usp49-003) 47649621-47672184 protein_coding
ENSMUST00000152724 (Usp49-002) 47672720-47681056 protein_coding
ENSMUSG00000092558 (Med20)
mediator complex subunit 20 		ENSMUST00000024778 (Med20-001) 47611582-47624418 protein_coding
ENSMUST00000133855 (Med20-004) 47611621-47613295 retained_intron
ENSMUST00000138638 (Med20-003) 47611608-47624248 retained_intron
ENSMUST00000149893 (Med20-002) 47611585-47619563 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L6_0001ENSDARG00000000229ENSDART00000037069ENSDARG00000046006ENSDART00000067638ENSDART00000138501CIL_0006L6_0002ENSMUSG00000033475ENSMUST00000113301ENSMUST00000113302ENSMUST00000143156ENSMUSG00000090115ENSMUST00000024779ENSMUST00000131550ENSMUST00000145314ENSMUST00000152724ENSMUSG00000092558ENSMUST00000024778ENSMUST00000133855ENSMUST00000138638ENSMUST00000149893
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L6_0001ENSDARG00000000229ENSDART00000037069ENSDARG00000046006ENSDART00000067638ENSDART00000138501CIL_0006L6_0002ENSMUSG00000033475ENSMUST00000113301ENSMUST00000113302ENSMUSG00000090115ENSMUST00000024779ENSMUST00000152724ENSMUSG00000092558ENSMUST00000024778ENSMUST00000138638
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000000229 ENSDART00000037069 N/A N/A N/A 3.119±1.12 N/A N/A 0.638±0.31 N/A 0.940±0.00 N/A 1.270±0.00 N/A N/A N/A
ENSDARG00000046006 ENSDART00000067638 N/A N/A N/A 0.934±0.05 N/A N/A 2.623±0.00 1.029±0.00 0.673±0.00 N/A 2.067±0.00 N/A N/A N/A
ENSDART00000138501 N/A N/A N/A 3.713±0.16 N/A N/A 4.695±1.09 N/A 0.478±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033475 ENSMUST00000113301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.228±0.00 N/A
ENSMUST00000113302 43.799±14.39 32.197±6.33 37.834±0.75 N/A 35.196±5.87 23.017±4.00 16.567±1.56 33.934±6.46 29.142±7.07 18.518±2.52 47.577±3.81 62.550±26.18 72.172±26.19 N/A
ENSMUST00000143156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090115 ENSMUST00000024779 4.548±0.25 3.059±0.39 3.507±0.05 7.498±2.76 3.644±0.16 5.221±0.47 1.448±0.01 2.136±0.34 3.468±1.76 3.304±0.33 1.482±0.10 3.961±0.67 3.919±0.40 3.452±1.91
ENSMUST00000131550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.705±14.82
ENSMUSG00000092558 ENSMUST00000024778 19.424±2.17 21.073±1.14 18.540±3.48 15.599±6.55 19.281±1.86 15.694±1.83 8.863±0.38 14.586±1.24 15.978±4.13 15.423±1.68 10.806±0.95 18.721±2.63 17.558±4.52 4.809±0.00
ENSMUST00000133855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138638 4.227±0.00 N/A 4.013±0.77 1.652±0.00 3.118±0.00 4.384±0.00 N/A N/A 3.795±0.68 3.510±0.25 N/A 3.397±0.13 1.971±0.31 N/A
ENSMUST00000149893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading