C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006L5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000001057-ENSDARG00000046006 CGP 7955 22:525997-539399
GeneTranscriptPositionBiotype
ENSDARG00000001057 (bysl)
bystin-like 		ENSDART00000001201 (bysl-001) 525997-533134 protein_coding
ENSDARG00000046006 (med20)
mediator complex subunit 20 		ENSDART00000067638 (med20-201) 533230-539399 protein_coding
ENSDART00000138501 (med20-001) 535945-539399 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006L5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023988-ENSMUSG00000092558 CGP 10090 17:47599331-47624418
GeneTranscriptPositionBiotype
ENSMUSG00000023988 (Bysl)
bystin-like 		ENSMUST00000024783 (Bysl-201) 47599331-47611492 protein_coding
ENSMUSG00000034165 (Ccnd3)
cyclin D3 		ENSMUST00000037333 (Ccnd3-001) 47505128-47599691 protein_coding
ENSMUST00000171031 (Ccnd3-201) 47505051-47599683 protein_coding
ENSMUST00000182060 (Ccnd3-004) 47505219-47579286 retained_intron
ENSMUST00000182129 (Ccnd3-008) 47505051-47598070 protein_coding
ENSMUST00000182209 (Ccnd3-006) 47593470-47599689 protein_coding
ENSMUST00000182281 (Ccnd3-005) 47593436-47598174 retained_intron
ENSMUST00000182506 (Ccnd3-015) 47505241-47598649 protein_coding
ENSMUST00000182539 (Ccnd3-017) 47596068-47599094 protein_coding
ENSMUST00000182591 (Ccnd3-013) 47505162-47578886 retained_intron
ENSMUST00000182846 (Ccnd3-020) 47594756-47598863 protein_coding
ENSMUST00000182848 (Ccnd3-012) 47505156-47598627 protein_coding
ENSMUST00000182874 (Ccnd3-007) 47593529-47597579 protein_coding
ENSMUST00000182935 (Ccnd3-010) 47505231-47593784 protein_coding
ENSMUST00000183014 (Ccnd3-014) 47505240-47579058 retained_intron
ENSMUST00000183044 (Ccnd3-002) 47505119-47599683 protein_coding
ENSMUST00000183061 (Ccnd3-009) 47505241-47507910 retained_intron
ENSMUST00000183158 (Ccnd3-016) 47594313-47597495 protein_coding
ENSMUST00000183177 (Ccnd3-003) 47505149-47599689 protein_coding
ENSMUST00000183206 (Ccnd3-019) 47597164-47598105 protein_coding
ENSMUST00000183210 (Ccnd3-011) 47505079-47597465 protein_coding
ENSMUST00000183256 (Ccnd3-018) 47596324-47598712 protein_coding
ENSMUSG00000092558 (Med20)
mediator complex subunit 20 		ENSMUST00000024778 (Med20-001) 47611582-47624418 protein_coding
ENSMUST00000133855 (Med20-004) 47611621-47613295 retained_intron
ENSMUST00000138638 (Med20-003) 47611608-47624248 retained_intron
ENSMUST00000149893 (Med20-002) 47611585-47619563 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L5_0001ENSDARG00000001057ENSDART00000001201ENSDARG00000046006ENSDART00000067638ENSDART00000138501CIL_0006L5_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L5_0001ENSDARG00000001057ENSDART00000001201ENSDARG00000046006ENSDART00000067638ENSDART00000138501CIL_0006L5_0002ENSMUSG00000023988ENSMUST00000024783ENSMUSG00000034165ENSMUST00000037333ENSMUST00000182209ENSMUST00000182281ENSMUST00000182506ENSMUST00000182874ENSMUST00000183044ENSMUSG00000092558ENSMUST00000024778ENSMUST00000138638
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001057 ENSDART00000001201 N/A N/A N/A 8.887±5.72 N/A N/A 18.882±14.04 4.398±0.00 22.353±0.00 N/A 42.834±0.00 N/A N/A N/A
ENSDARG00000046006 ENSDART00000067638 N/A N/A N/A 0.934±0.05 N/A N/A 2.623±0.00 1.029±0.00 0.673±0.00 N/A 2.067±0.00 N/A N/A N/A
ENSDART00000138501 N/A N/A N/A 3.713±0.16 N/A N/A 4.695±1.09 N/A 0.478±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023988 ENSMUST00000024783 10.943±1.49 42.422±1.82 13.118±0.30 13.470±6.80 11.515±3.88 9.195±0.51 7.665±0.65 9.934±1.46 14.587±11.30 14.890±1.00 5.918±0.44 10.781±2.24 12.821±6.97 12.401±3.50
ENSMUSG00000034165 ENSMUST00000037333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.458±1.75 N/A N/A
ENSMUST00000171031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182209 44.718±5.57 178.231±31.87 35.305±0.36 13.082±0.12 45.486±20.67 42.975±2.82 14.869±1.82 34.225±4.49 62.816±61.44 58.638±7.06 6.197±0.40 51.916±14.18 46.851±30.81 47.667±22.08
ENSMUST00000182281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.107±0.00 N/A N/A
ENSMUST00000182506 34.543±7.83 N/A N/A N/A 36.810±0.00 N/A 13.846±1.65 23.767±2.30 100.348±56.41 N/A N/A N/A 37.305±6.04 66.455±8.78
ENSMUST00000182539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182874 N/A 578.453±208.19 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183044 N/A 67.897±14.39 N/A N/A N/A N/A N/A N/A 2.942±0.00 N/A N/A N/A N/A N/A
ENSMUST00000183061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092558 ENSMUST00000024778 19.424±2.17 21.073±1.14 18.540±3.48 15.599±6.55 19.281±1.86 15.694±1.83 8.863±0.38 14.586±1.24 15.978±4.13 15.423±1.68 10.806±0.95 18.721±2.63 17.558±4.52 4.809±0.00
ENSMUST00000133855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138638 4.227±0.00 N/A 4.013±0.77 1.652±0.00 3.118±0.00 4.384±0.00 N/A N/A 3.795±0.68 3.510±0.25 N/A 3.397±0.13 1.971±0.31 N/A
ENSMUST00000149893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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