C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024043 Arhgap28 10090 - 17:67842713-68004120 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024840 Arhgap28-001 67842713-68004120 protein_coding
  ENSMUST00000163865 Arhgap28-006 67845735-67901471 protein_coding
  ENSMUST00000164647 Arhgap28-003 67845110-67950940 protein_coding
  ENSMUST00000170581 Arhgap28-004 67868963-67896110 protein_coding
  ENSMUST00000170813 Arhgap28-005 67857417-67873048 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024840ENSMUST00000163865ENSMUST00000164647ENSMUST00000170581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024840 3.808±2.73 5.204±3.75 3.209±0.91 1.595±1.28 1.635±0.56 1.277±0.26 0.899±0.17 1.542±0.35 0.306±0.23 5.073±0.61 0.111±0.02 12.725±6.08 4.346±1.52 0.286±0.15
ENSMUST00000163865 N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A 9.145±0.00 4.701±0.81 0.073±0.00
ENSMUST00000164647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A
ENSMUST00000170581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L2 CIL_0006L2_0002 CGP 17:67697265-68004120
CIL_0006KZ CIL_0006KZ_0002 CGP 17:67842713-68777961

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005634 IEA nucleus
GO:0007165 IEA signal transduction
GO:0030054 IEA cell junction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005872 arhgap28 Rho GTPase activating protein 28 protein_coding Danio_rerio
ENSG00000088756 ARHGAP28 Rho GTPase activating protein 28 protein_coding Homo_sapiens

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