C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal V0 subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024121 Atp6v0c 10090 - 17:24163866-24169702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024932 Atp6v0c-001 24163866-24169461 protein_coding
  ENSMUST00000098862 Atp6v0c-003 24164153-24169677 protein_coding
  ENSMUST00000148541 Atp6v0c-004 24164420-24169648 protein_coding
  ENSMUST00000150647 Atp6v0c-005 24164542-24169702 protein_coding
  ENSMUST00000151061 Atp6v0c-002 24163866-24167029 processed_transcript
  ENSMUST00000156061 Atp6v0c-006 24164538-24169066 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024932ENSMUST00000098862ENSMUST00000151061
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024932 239.332±12.47 663.023±35.91 164.405±27.41 349.585±114.42 273.652±116.48 282.324±33.24 146.820±36.09 715.948±75.63 203.483±25.86 299.759±25.19 75.549±4.87 308.827±146.31 198.677±123.10 72.851±32.76
ENSMUST00000098862 87.632±13.95 N/A 73.927±19.89 328.764±0.00 154.252±24.05 85.582±5.48 71.723±14.13 175.919±26.94 95.542±47.72 94.402±18.36 N/A 145.279±33.42 68.856±0.00 40.616±6.12
ENSMUST00000151061 N/A N/A N/A N/A 9.851±0.00 N/A N/A N/A N/A N/A N/A 4.753±0.74 2.518±0.08 0.386±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005765 IEA lysosomal membrane
GO:0005925 IEA focal adhesion
GO:0007035 TAS vacuolar acidification
GO:0007042 TAS lysosomal lumen acidification
GO:0008553 ISA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016471 TAS vacuolar proton-transporting V-type ATPase complex
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0031625 IEA ubiquitin protein ligase binding
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036577 atp6v0cb ATPase, H+ transporting, lysosomal, V0 subunit c, b protein_coding Danio_rerio
ENSDARG00000057853 atp6v0ca ATPase, H+ transporting, lysosomal, V0 subunit c, a protein_coding Danio_rerio
ENSG00000185883 ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c protein_coding Homo_sapiens

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