C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024932 Atp6v0c-001 ENSMUSG00000024121 10090 - 17:24163866-24169461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024932
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024932 239.332±12.47 663.023±35.91 164.405±27.41 349.585±114.42 273.652±116.48 282.324±33.24 146.820±36.09 715.948±75.63 203.483±25.86 299.759±25.19 75.549±4.87 308.827±146.31 198.677±123.10 72.851±32.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005765 IEA lysosomal membrane
GO:0005925 IEA focal adhesion
GO:0007035 TAS vacuolar acidification
GO:0007042 TAS lysosomal lumen acidification
GO:0008553 ISA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016471 TAS vacuolar proton-transporting V-type ATPase complex
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0031625 IEA ubiquitin protein ligase binding
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123621 atp6v0ca-001 protein_coding Danio_rerio 0 344
ENSDART00000023859 atp6v0ca-002 protein_coding Danio_rerio 0 344
ENST00000330398 ATP6V0C-001 protein_coding Homo_sapiens 0 782
ENST00000564543 RP11-20I23.1-001 protein_coding Homo_sapiens 0 656
ENST00000564973 ATP6V0C-005 protein_coding Homo_sapiens 0 656
ENST00000565223 ATP6V0C-004 protein_coding Homo_sapiens 0 617
ENST00000568562 ATP6V0C-003 protein_coding Homo_sapiens 0 363
ENST00000618152 ATP6V0C-201 protein_coding Homo_sapiens 0 739

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