C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098862 Atp6v0c-003 ENSMUSG00000024121 10090 - 17:24164153-24169677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000098862
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000098862 87.632±13.95 73.927±19.89 328.764±0.00 154.252±24.05 85.582±5.48 71.723±14.13 175.919±26.94 95.542±47.72 94.402±18.36 145.279±33.42 68.856±0.00 40.616±6.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007035 TAS vacuolar acidification
GO:0007042 TAS lysosomal lumen acidification
GO:0008553 ISA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016471 TAS vacuolar proton-transporting V-type ATPase complex
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123621 atp6v0ca-001 protein_coding Danio_rerio 0 344
ENSDART00000023859 atp6v0ca-002 protein_coding Danio_rerio 0 344
ENST00000330398 ATP6V0C-001 protein_coding Homo_sapiens 0 737
ENST00000564543 RP11-20I23.1-001 protein_coding Homo_sapiens 0 656
ENST00000564973 ATP6V0C-005 protein_coding Homo_sapiens 0 656
ENST00000565223 ATP6V0C-004 protein_coding Homo_sapiens 0 617
ENST00000568562 ATP6V0C-003 protein_coding Homo_sapiens 0 363
ENST00000618152 ATP6V0C-201 protein_coding Homo_sapiens 0 737

Loading